Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.
☆67May 12, 2021Updated 5 years ago
Alternatives and similar repositories for iterativeWGCNA
Users that are interested in iterativeWGCNA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Sep 30, 2023Updated 2 years ago
- PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)☆300Feb 17, 2025Updated last year
- Version 2.1.0 released☆23Sep 16, 2019Updated 6 years ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆13Feb 16, 2019Updated 7 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆30Jul 26, 2015Updated 10 years ago
- Library for KEGG pathway enrichment analysis☆19Updated this week
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- BoostDiff - Inference of differential networks from gene expression data☆13Jan 11, 2024Updated 2 years ago
- ☆12Feb 12, 2024Updated 2 years ago
- 生命科学者のためのDr.Bonoデータ解析実践道場☆10Sep 19, 2019Updated 6 years ago
- ARCHIVED: this has been folded into the owlapi☆11Oct 27, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- High-fidelity 5mC DNA methylation detection model for PacBio HiFi reads☆13Apr 10, 2026Updated 2 months ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆65May 19, 2026Updated 3 weeks ago
- A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.☆15May 1, 2023Updated 3 years ago
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- ☆10Oct 17, 2019Updated 6 years ago
- Python library to handle Gene Ontology (GO) terms☆894May 12, 2026Updated last month
- ☆17Jun 17, 2021Updated 5 years ago
- ☆14Feb 21, 2023Updated 3 years ago
- Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data☆11Jun 7, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An R/Bioconductor package to identify higher-order molecular phenotypes☆19Jan 15, 2024Updated 2 years ago
- Optimization process of WGCNA hierarchical clustering with k-means☆15Mar 14, 2019Updated 7 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Apr 22, 2019Updated 7 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆36Apr 13, 2021Updated 5 years ago
- Analysis for svaseq paper☆20Aug 20, 2014Updated 11 years ago
- Multi-Omics Factor Analysis☆267Sep 30, 2020Updated 5 years ago
- Scripts to help get fastqs☆19May 13, 2026Updated last month
- helixlife-WGCNA-2018 https://github.com/xndless/helixlife-WGCNA-2018.git☆13Oct 25, 2018Updated 7 years ago
- Signed LD profile regression code☆19Aug 1, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆24Jul 10, 2024Updated last year
- Python library for processing and visualizing Hi-C data☆20May 31, 2020Updated 6 years ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- WGBS/NOMe-seq Data Processing & Differential Methylation Analysis☆148May 20, 2023Updated 3 years ago
- Gene ontology (GO) semantic similarity library for Python☆24Sep 28, 2018Updated 7 years ago
- time course regulatory analysis from paired gene expression and chromatin accessibility time course data☆11Nov 10, 2023Updated 2 years ago
- Cooler demo using a Jupyter notebook Binder☆19Sep 24, 2020Updated 5 years ago