Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.
☆67May 12, 2021Updated 5 years ago
Alternatives and similar repositories for iterativeWGCNA
Users that are interested in iterativeWGCNA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Sep 30, 2023Updated 2 years ago
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆30Jul 26, 2015Updated 11 years ago
- BoostDiff - Inference of differential networks from gene expression data☆14Jan 11, 2024Updated 2 years ago
- ☆13Feb 16, 2019Updated 7 years ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- 生命科学者のためのDr.Bonoデータ解析実践道場☆10Sep 19, 2019Updated 6 years ago
- A robust PCA method of tumor clone and evolution inference from single-cell sequencing data.☆12May 28, 2020Updated 6 years ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- Mapping pipeline for snmC-seq based technologies.☆20Sep 25, 2023Updated 2 years ago
- Library for KEGG pathway enrichment analysis☆19Jul 12, 2026Updated last month
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- ☆10Oct 17, 2019Updated 6 years ago
- ☆12Feb 12, 2024Updated 2 years ago
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆66May 19, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ARCHIVED: this has been folded into the owlapi☆11Oct 27, 2020Updated 5 years ago
- High-fidelity 5mC DNA methylation detection model for PacBio HiFi reads☆14Apr 10, 2026Updated 4 months ago
- helixlife-WGCNA-2018 https://github.com/xndless/helixlife-WGCNA-2018.git☆13Oct 25, 2018Updated 7 years ago
- Python library to handle Gene Ontology (GO) terms☆908Aug 21, 2026Updated 2 weeks ago
- A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.☆15May 1, 2023Updated 3 years ago
- ☆14Feb 21, 2023Updated 3 years ago
- Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data☆11Jun 7, 2022Updated 4 years ago
- An R/Bioconductor package to identify higher-order molecular phenotypes☆19Jan 15, 2024Updated 2 years ago
- Multi-Omics Factor Analysis☆269Sep 30, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Apr 22, 2019Updated 7 years ago
- Analysis for svaseq paper☆20Aug 20, 2014Updated 12 years ago
- Optimization process of WGCNA hierarchical clustering with k-means☆16Mar 14, 2019Updated 7 years ago
- Python library for processing and visualizing Hi-C data☆20May 31, 2020Updated 6 years ago
- ☆17Jun 17, 2021Updated 5 years ago
- Graph Learning of INTER-protein contacts☆11Feb 20, 2022Updated 4 years ago
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆24Jul 10, 2024Updated 2 years ago
- WGBS/NOMe-seq Data Processing & Differential Methylation Analysis☆148May 20, 2023Updated 3 years ago
- Signed LD profile regression code☆19Aug 1, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reference-agnostic Representation and Visualization of Pan-genomes☆19Sep 16, 2021Updated 4 years ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- Data/analysis repository for "Interrogation of human hematopoiesis..." paper☆21Jul 9, 2019Updated 7 years ago
- time course regulatory analysis from paired gene expression and chromatin accessibility time course data☆11Nov 10, 2023Updated 2 years ago
- A tutorial on structural variant calling for short read sequencing data☆45Oct 24, 2024Updated last year
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10May 29, 2017Updated 9 years ago
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data☆43Oct 15, 2025Updated 10 months ago