Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.
☆44Sep 17, 2021Updated 4 years ago
Alternatives and similar repositories for dynamicTreeCut
Users that are interested in dynamicTreeCut are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python function that performs a balanced cut-tree of a SciPy linkage matrix☆13Jul 19, 2023Updated 3 years ago
- Find nodes in hierarchical clustering that are statistically significant☆32Oct 15, 2017Updated 8 years ago
- 🌊 Robust workflows for gathering data about your local ocean.☆14Jul 19, 2023Updated 3 years ago
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 4 months ago
- Pipeline to apply encoded Kmer analysis to protein sequences☆16Jun 22, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Python package to query and analyse UniProt☆25Sep 8, 2020Updated 5 years ago
- Hierarchical Graph Clustering using Node Pair Sampling (MLG, KDD Workshop) - Multi-scale Clustering in Graphs using Modularity (DiVA)☆17Oct 9, 2020Updated 5 years ago
- Python Library for interaction with US NLM Daily Med API☆12Feb 9, 2017Updated 9 years ago
- "Rewriting protein alphabets with language models"☆24Jun 9, 2026Updated 2 months ago
- ☆47Jun 21, 2019Updated 7 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 5 months ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 5 months ago
- A python library for accessing 2bit files☆21Apr 21, 2026Updated 3 months ago
- Rna-seq pipeline, From FASTQ to differential expression analysis...☆20Mar 13, 2017Updated 9 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Draw UpSet plots with Matplotlib☆385May 2, 2024Updated 2 years ago
- ☆12Oct 10, 2024Updated last year
- ☆12Feb 12, 2018Updated 8 years ago
- Augmented Interval Tree implemented in Cython/C☆20Apr 13, 2026Updated 3 months ago
- ☆10Jul 23, 2020Updated 6 years ago
- Camiel's scATAC-seq analysis pipeline☆15Apr 15, 2024Updated 2 years ago
- SRA python tools☆11Jun 9, 2021Updated 5 years ago
- combining p-values using modified stouffer-liptak for spatially correlated results (probes)☆49Mar 18, 2022Updated 4 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Sep 4, 2019Updated 6 years ago
- An implementation of the self-tuning spectral clustering algorithm described in Zelnik-Manor and Perona (2004)☆12Mar 27, 2018Updated 8 years ago
- Accurate and fast taxonomic classification using pseudoaligning☆21Sep 16, 2017Updated 8 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Mar 27, 2021Updated 5 years ago
- bleeding edge (python) packages...☆15Nov 22, 2015Updated 10 years ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Oct 7, 2019Updated 6 years ago
- R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)☆22Aug 28, 2019Updated 6 years ago
- A robust DE test method that accounts for the uncertainty in pseudotime inference☆40Mar 2, 2025Updated last year
- A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)☆20Jun 4, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- centos 7 / ubuntu搭建torjan,公眾號:swa_yo☆12Feb 15, 2020Updated 6 years ago
- EPInformer workflows for gene-expression prediction from DNA sequence, epigenomic signals, and chromatin contacts.☆61Jul 17, 2026Updated 3 weeks ago
- ☆13Jun 15, 2024Updated 2 years ago
- Bioinformatic approach to identify functional transcription factor binding motifs☆11May 16, 2022Updated 4 years ago
- toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files☆22Jul 23, 2026Updated 2 weeks ago
- Code for "Learning Deep Features in Instrumental Variable Regression" (https://arxiv.org/abs/2010.07154)☆16Sep 16, 2024Updated last year
- ☆12Nov 1, 2023Updated 2 years ago