gdurif / pCMFLinks
pCMF R package
☆14Updated 6 years ago
Alternatives and similar repositories for pCMF
Users that are interested in pCMF are comparing it to the libraries listed below
Sorting:
- ☆29Updated 2 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- Population balance analysis☆44Updated 6 years ago
- post-clustering differential expression test☆35Updated 6 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆55Updated 2 years ago
- A python package for chromVAR☆28Updated 2 years ago
- PRObabilistic Simulations of ScRNA-seq Tree-like Topologies☆26Updated last year
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆16Updated 5 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Single-cell Hierarchical Poisson Factorization☆70Updated 2 years ago
- ☆21Updated last year
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Updated 4 years ago
- Calibrate and compare methods for denoising single-cell RNA-seq data☆2Updated 4 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Updated 6 years ago
- ☆16Updated 6 years ago
- An R package to construct Elastic Principal Graphs☆22Updated 5 years ago
- Preprocessing pipeline for (sc)ATAC data☆10Updated 3 years ago
- ☆28Updated 6 years ago
- SCODE : an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation☆44Updated 5 years ago
- Bayesian inference of clone-specific gene expression estimates by integrating single-cell RNA-seq and single-cell DNA-seq data☆33Updated 4 years ago
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆18Updated 3 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 10 months ago
- ☆35Updated 3 months ago
- Filtering of Poison noise on a single-cell RNA-seq UMI count matrix☆75Updated last month
- Dynamical systems methods for RNA velocity analysis☆24Updated 4 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆35Updated 2 months ago