gdurif / pCMFLinks
pCMF R package
☆14Updated 6 years ago
Alternatives and similar repositories for pCMF
Users that are interested in pCMF are comparing it to the libraries listed below
Sorting:
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆61Updated 3 years ago
- ☆29Updated 3 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- Population balance analysis☆44Updated 6 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- Single-cell Hierarchical Poisson Factorization☆74Updated 3 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆53Updated 5 years ago
- MultiMAP for integration of single cell multi-omics☆55Updated 2 years ago
- ☆48Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆45Updated last year
- post-clustering differential expression test☆36Updated 6 years ago
- This is the code release for paper Continuous State HMMs for Modeling Time Series Single Cell RNA-Seq Data☆23Updated 8 years ago
- ☆32Updated 6 years ago
- An R package to construct Elastic Principal Graphs☆24Updated 6 years ago
- SCODE : an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation☆46Updated 6 years ago
- Multi-sample Unified Discriminant ANalysis☆74Updated 2 years ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Scripts for data and figure generation in SAVER paper☆17Updated 5 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- The Self-Assembling-Manifold (SAM) algorithm.☆46Updated last month
- ☆16Updated 8 years ago
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- Geometry-preserving random sampling☆95Updated last year
- ☆23Updated last year
- easy access to benchmark datasets☆50Updated 7 years ago
- Bayesian inference of clone-specific gene expression estimates by integrating single-cell RNA-seq and single-cell DNA-seq data☆36Updated 5 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆19Updated 5 years ago
- An interface for Nested Stochastic Block Model for single cell analysis☆36Updated 4 months ago
- Single-cell Scalable Visualization and Analytics☆27Updated 6 years ago