gdurif / pCMFLinks
pCMF R package
☆14Updated 6 years ago
Alternatives and similar repositories for pCMF
Users that are interested in pCMF are comparing it to the libraries listed below
Sorting:
- ☆29Updated 2 years ago
- Single-cell Hierarchical Poisson Factorization☆74Updated 3 years ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆60Updated 3 years ago
- Population balance analysis☆44Updated 6 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆14Updated 6 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆53Updated 5 years ago
- A study to compare methods for clustering of scRNA-seq data☆44Updated last year
- ☆31Updated 6 years ago
- ☆48Updated 6 years ago
- A collection of scripts and tools for loading, processing, and handling single cell data.☆76Updated 4 months ago
- An interface for Nested Stochastic Block Model for single cell analysis☆36Updated 4 months ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆41Updated 3 years ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40Updated 3 years ago
- easy access to benchmark datasets☆50Updated 7 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- SCODE : an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation☆46Updated 6 years ago
- Comparison of dimensionality reduction methods☆30Updated 5 years ago
- Geometry-preserving random sampling☆95Updated last year
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- ☆26Updated last year
- An R package to construct Elastic Principal Graphs☆24Updated 6 years ago
- This contains the dataset for comparing scRNA-seq analysis methods☆92Updated 5 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- Modelling DNA methylation profiles☆24Updated 5 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 5 years ago
- Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.☆17Updated 6 years ago
- Multi-sample Unified Discriminant ANalysis☆74Updated 2 years ago
- ☆37Updated last week