nfusi / qvalueLinks
Converts p-values in q-values, see (Storey and Tibshirani, 2003)
☆29Updated 8 years ago
Alternatives and similar repositories for qvalue
Users that are interested in qvalue are comparing it to the libraries listed below
Sorting:
- mygene is an easy-to-use Python wrapper to access MyGene.Info services.☆92Updated 7 months ago
- A simple pythonic interface to biomart.☆56Updated 5 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Updated 6 years ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆51Updated 3 months ago
- A Python package for gene network analysis☆32Updated 3 years ago
- University of Cambridge PhD thesis☆15Updated 4 years ago
- Python package to plot sequence logos☆29Updated last year
- Code and data used in The Great Repertoire Project☆30Updated 4 years ago
- Python biomart API☆68Updated 2 years ago
- Downloader for ENCODE☆32Updated 4 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆65Updated 4 years ago
- Scripts for building computational models of gene regulation with tensorflow☆27Updated 2 years ago
- This repository hosts a minimal version of a Python API for BPNet.☆48Updated this week
- Parsing tools for GTF (gene transfer format) files☆121Updated 6 months ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆59Updated this week
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆25Updated last year
- ☆51Updated last year
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.☆26Updated 3 years ago
- DRUGZ software☆23Updated 4 years ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago
- Fit generalized linear models in python.☆28Updated 2 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆40Updated 3 years ago
- A lite implementation of tfmodisco, a motif discovery algorithm for genomics experiments.☆85Updated 2 months ago
- Avocado is a multi-scale deep tensor factorization model that learns a latent representation of the human epigenome and enables imputatio…☆119Updated 3 years ago
- bioinformatics plotting and tools☆59Updated last year
- ☆38Updated last year
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago