A positive-unlabeled ensemble learning framework for disease gene prioritization.
☆21Nov 10, 2025Updated 9 months ago
Alternatives and similar repositories for speos
Users that are interested in speos are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code for paper "Principled feature attribution for unsupervised gene expression analysis"☆13Mar 7, 2023Updated 3 years ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆13Oct 30, 2024Updated last year
- A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests and viral simulations at scale. Related manuscr…☆15Apr 12, 2026Updated 4 months ago
- Network-based module discovery algorithm with high rate of empirically-validated term calls☆14Oct 22, 2023Updated 2 years ago
- GWAS genetics Fine-mapping method☆18Jul 27, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This R package for performing module repertoire analyses and generating fingerprint representations☆19Sep 16, 2021Updated 4 years ago
- ☆11May 3, 2022Updated 4 years ago
- a deep learning framework for essential protein prediction☆13Mar 24, 2023Updated 3 years ago
- ☆19Apr 25, 2023Updated 3 years ago
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆13Jan 30, 2023Updated 3 years ago
- A Python wrapper for the bioRxiv API.☆11Aug 18, 2021Updated 5 years ago
- Molecular interactions inference from single-cell multi-omics data☆32May 7, 2026Updated 3 months ago
- Efficient retrieval, download, and unification of genomic data from leading biodiversity databases☆18Aug 22, 2026Updated 2 weeks ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 4 years ago
- ☆12Dec 17, 2025Updated 8 months ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆17May 16, 2023Updated 3 years ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Oct 6, 2025Updated 11 months ago
- ☆19May 5, 2020Updated 6 years ago
- A GWAS course☆12Nov 4, 2021Updated 4 years ago
- Auto-annotations from Mouse brain development☆12Jul 11, 2020Updated 6 years ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Standard operating procedures for H3ABionet data processing and analyses☆11Aug 30, 2021Updated 5 years ago
- Allen Brain Atlas utilities, parsers and data structures☆11Jun 25, 2017Updated 9 years ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆12May 9, 2025Updated last year
- interactive Multi Objective K-mer Analysis☆25Mar 5, 2023Updated 3 years ago
- ☆27Oct 8, 2025Updated 10 months ago
- A fast, precise, pure Python implementation of Fisher's exact test☆12Mar 27, 2017Updated 9 years ago
- 🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.☆12Jan 17, 2021Updated 5 years ago
- Code for the meQTL analyses presented in Hawe et al. 2021 Nature Genetics☆14Jan 14, 2022Updated 4 years ago
- ☆14Feb 21, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Network construction Algorithm☆23Sep 5, 2024Updated 2 years ago
- ☆13May 27, 2025Updated last year
- Graph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis☆11May 1, 2023Updated 3 years ago
- Breast cancer risk prediction using genotyped data☆12Oct 11, 2018Updated 7 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆25Aug 3, 2023Updated 3 years ago
- The official repository for the ARSENAL model☆19Jul 3, 2026Updated 2 months ago
- Workshop (2-6 hours): cleaning, missing value imputation, EDA, ensemble learning, calibration, variable importance ranking, accumulated l…☆14Jun 20, 2020Updated 6 years ago