stormlovetao / eQTLQCLinks
☆26Updated 5 years ago
Alternatives and similar repositories for eQTLQC
Users that are interested in eQTLQC are comparing it to the libraries listed below
Sorting:
- Enhanced version of the FastQTL QTL mapper☆68Updated 2 years ago
- An R package to time somatic mutations☆64Updated 4 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated 2 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 6 months ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆53Updated last week
- ☆78Updated 5 months ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆71Updated last week
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- ATAC-seq processing pipeline☆34Updated 3 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆62Updated 2 years ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆67Updated 6 months ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆52Updated last year
- RNA editing tests☆17Updated 5 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated last week
- A modular, containerized pipeline for ATAC-seq data processing☆59Updated 2 weeks ago
- Links to ATAC-seq analysis tools☆70Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- Estimate locus specific human LINE-1 expression.☆39Updated 3 weeks ago
- ☆72Updated 2 years ago
- SNV calling from single cell sequencing☆109Updated 10 months ago
- An integrated platform for modeling gene-regulatory dynamics and networks☆32Updated last year
- A toolkit for QC and visualization of ATAC-seq results.☆71Updated 9 months ago
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- Tutorial Website☆59Updated 4 years ago
- DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…☆21Updated last year
- Genomic Identification of Significant Targets in Cancer (GISTIC), version 2☆51Updated 3 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 7 years ago