stormlovetao / eQTLQCLinks
☆26Updated 4 years ago
Alternatives and similar repositories for eQTLQC
Users that are interested in eQTLQC are comparing it to the libraries listed below
Sorting:
- Enhanced version of the FastQTL QTL mapper☆68Updated 2 years ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆51Updated this week
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆66Updated 5 months ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 5 months ago
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- Tutorial Website☆59Updated 4 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 3 months ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated last year
- ☆62Updated 3 years ago
- RNA editing tests☆17Updated 4 years ago
- An R package to time somatic mutations☆62Updated 4 years ago
- ATAC-seq processing pipeline☆34Updated 3 years ago
- Software for estimating correlation of trait effect sizes across populations☆49Updated 3 months ago
- Quality control steps for GWAS☆24Updated 2 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆41Updated 9 months ago
- A modular, containerized pipeline for ATAC-seq data processing☆59Updated 3 months ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated last week
- An integrated platform for modeling gene-regulatory dynamics and networks☆32Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated 2 years ago
- ☆77Updated 5 months ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆53Updated 4 months ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆68Updated this week
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆52Updated last year
- SNV calling from single cell sequencing☆106Updated 10 months ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆73Updated 2 months ago
- A toolkit for QC and visualization of ATAC-seq results.☆71Updated 8 months ago