☆10Sep 20, 2022Updated 4 years ago
Alternatives and similar repositories for spliceJAC
Users that are interested in spliceJAC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Apr 8, 2026Updated 5 months ago
- ☆17Nov 13, 2021Updated 4 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆18Jul 14, 2023Updated 3 years ago
- ☆13Jun 15, 2021Updated 5 years ago
- Demultiplexing and debarcoding tool designed for LR-Split-seq data.☆25Oct 19, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Gencode UTR fix☆17Jan 11, 2023Updated 3 years ago
- Dynamical information enables inference of gene regulation at single-cell scale☆12Jun 9, 2025Updated last year
- a pipeline for quantification of circular RNA.☆14May 7, 2017Updated 9 years ago
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated 2 years ago
- Hi-C data super-resolution with generative adversarial networks☆15Jul 6, 2021Updated 5 years ago
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆11Nov 20, 2024Updated last year
- An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)☆40Aug 22, 2024Updated 2 years ago
- Low-dimensional Projection of Single Cell Velocity☆29Aug 26, 2022Updated 4 years ago
- A Python library to visualize and analyze long-read transcriptomes☆69Jan 19, 2026Updated 8 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆12Mar 18, 2026Updated 6 months ago
- Multiome GRN inference.☆143Apr 10, 2026Updated 5 months ago
- NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)☆12Mar 2, 2023Updated 3 years ago
- A Weighted Exact Test for Mutually Exclusive Mutations in Cancer☆20Sep 30, 2018Updated 7 years ago
- Dynamic inference from single-cell snapshots by optimal transport☆21Mar 14, 2024Updated 2 years ago
- Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data☆21Aug 19, 2020Updated 6 years ago
- Bayesian Consensus Clustering, packaged up from code by Eric F. Lock☆20Jun 15, 2023Updated 3 years ago
- Mapping of GENCODE gene annotation set files to older assembies☆14Apr 16, 2026Updated 5 months ago
- ActiveDriverDB☆12May 1, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- A package for analyzing spatial transcriptomics data with Gaussian smoothing, spatial gene correlation network clustering, gene module vi…☆25Apr 3, 2026Updated 5 months ago
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Sep 13, 2023Updated 3 years ago
- R package to detect splicing QTLs (sQTLs)☆13Jul 3, 2023Updated 3 years ago
- This is the code release for paper Continuous State HMMs for Modeling Time Series Single Cell RNA-Seq Data☆22Jan 22, 2018Updated 8 years ago
- Add functional variant annotation to MAF file☆11Nov 20, 2024Updated last year
- GEO RNA-seq Experiments Processing Pipeline☆23Oct 25, 2019Updated 6 years ago
- Identify circular trajectories in scRNA-seq data using an autoencoder with sinusoidal activations☆24Dec 17, 2021Updated 4 years ago
- uPU, nnPU and PN learning with Extra Trees classifier.☆20Dec 2, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Dynamic models for single-cell RNA-seq time series.☆40Sep 24, 2018Updated 7 years ago
- ☆12May 30, 2023Updated 3 years ago
- Workflow for Sequenza, cellularity and ploidy☆28Jun 11, 2026Updated 3 months ago
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆122Mar 10, 2026Updated 6 months ago
- AI-powered IDE for bioinformatics — built by biologists, for biologists☆97Sep 7, 2026Updated 2 weeks ago
- Repository of the pipeline of computational methods for logical modelling of biological networks that are deregulated in diseases, develo…☆10Mar 14, 2026Updated 6 months ago
- Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differentia…☆16Jan 11, 2024Updated 2 years ago