huiqu18 / GeneMutationFromHELinks
Gene mutation and pathway activity prediction from H&E slides
☆35Updated 3 years ago
Alternatives and similar repositories for GeneMutationFromHE
Users that are interested in GeneMutationFromHE are comparing it to the libraries listed below
Sorting:
- ☆49Updated 3 years ago
- A pan-cancer platform for mutation prediction from routine histology☆69Updated 4 years ago
- ☆57Updated 3 years ago
- HCC_Deep_learning☆19Updated 5 years ago
- Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning☆45Updated 4 years ago
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆72Updated 8 months ago
- First commit☆63Updated 3 years ago
- A set of codes to classify H&E slides using deep learning☆30Updated 3 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆18Updated 6 years ago
- Code from Foersch et al. (Under Construction / Development)☆37Updated 2 years ago
- Histopathology Image Analysis☆92Updated 2 years ago
- Data and code to accompany our Nature publication☆46Updated 3 years ago
- A pipeline to segment tissue from the background in histological images☆70Updated 2 years ago
- AI-based pathology predicts origins for cancers of unknown primary - Nature☆175Updated 3 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆18Updated 5 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 4 years ago
- ☆20Updated 2 years ago
- Code for the im4MEC model described in the paper 'Interpretable deep learning model to predict the molecular classification of endometria…☆51Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆69Updated 2 years ago
- Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning☆35Updated 4 years ago
- [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…☆24Updated 2 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆140Updated 4 years ago
- Pipeline for computational pathology☆38Updated last year
- Scripts for data processing☆48Updated last year
- ☆17Updated 3 years ago
- GrandQC tool for tissue detection and quality control in pathology☆68Updated 7 months ago
- H&E histopathological staining normalization☆109Updated 5 years ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Updated 2 years ago
- ☆33Updated 2 years ago
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆103Updated 6 years ago