Alternatives and similar repositories for Hist2Cell

Users that are interested in Hist2Cell are comparing it to the libraries listed below

• almaan / her2st
  Her2 Breast Cancer Project
  ☆92Updated 3 years ago
• bowang-lab / BLEEP
  Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning
  ☆83Updated last year
• GuangyuWangLab2021 / Loki
  A visual–omics foundation model to bridge histopathology with spatial transcriptomics
  ☆128Updated 7 months ago
• daviddaiweizhang / istar
  ☆158Updated last year
• SydneyBioX / GHIST
  ☆63Updated 4 months ago
• biomed-AI / Hist2ST
  ☆53Updated 3 years ago
• ludvb / xfuse
  Super-resolved spatial transcriptomics by deep data fusion
  ☆73Updated 2 years ago
• bryanhe / ST-Net
  Deep learning on histopathology images.
  ☆140Updated 4 years ago
• ratschlab / HistoPlexer
  ☆28Updated 10 months ago
• GlastonburyC / RNAPath
  Self-supervised representation learning combining GTEx histology, RNA-seq and WGS
  ☆33Updated 9 months ago
• maxpmx / HisToGene
  PyTorch implementation of HisToGene
  ☆52Updated 4 years ago
• mahmoodlab / MAPS
  Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
  ☆63Updated last year
• fdu-wangfeilab / stDiff
  A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.
  ☆25Updated last year
• chenhcs / SCS
  Sub-cellular spatial transcriptomics Cell Segmentation
  ☆68Updated 2 years ago
• bowang-lab / scGPT-spatial
  ☆126Updated 11 months ago
• gevaertlab / sequoia-pub
  SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention
  ☆49Updated 7 months ago
• KEAML-JLU / SpatialEx
  The source code for "High-Parameter Spatial Multi-Omics through Histology-Anchored Integration"
  ☆24Updated last week
• loicchadoutaud / sCellST
  ☆18Updated last week
• JinmiaoChenLab / SEDR
  ☆66Updated last year
• JiangBioLab / DeepST
  Identify spatial domain
  ☆88Updated 8 months ago
• uhlerlab / cross-modal-autoencoders
  ☆56Updated 3 years ago
• kpcoleman / miso
  ☆33Updated last year
• AltschulerWu-Lab / MUSE
  MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…
  ☆37Updated 3 years ago
• AI4SCR / ATHENA
  ☆35Updated this week
• rendeirolab / LazySlide
  Accessible and interoperable whole slide image analysis
  ☆181Updated 2 weeks ago
• theislab / nicheformer
  Repository for Nicheformer: a foundation model for single-cell and spatial omics
  ☆149Updated 2 months ago
• jianhuupenn / SpaGCN
  SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…
  ☆255Updated 2 years ago
• mahmoodlab / HEST
  Integrating histology and spatial transcriptomics - NeurIPS 2024
  ☆358Updated 2 weeks ago
• recolyce / HistoCell
  ☆52Updated 10 months ago
• JiawenChenn / STimage-1K4M
  ☆79Updated 8 months ago