zhanglabtools / STAligner
STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages
☆19Updated last year
Alternatives and similar repositories for STAligner:
Users that are interested in STAligner are comparing it to the libraries listed below
- ☆52Updated 6 months ago
- ☆29Updated 8 months ago
- ☆24Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆33Updated 7 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆68Updated 2 years ago
- overview of spatial datasets☆70Updated 11 months ago
- ☆18Updated 5 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆48Updated 7 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆43Updated last year
- ☆104Updated 10 months ago
- ☆49Updated 3 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆84Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆34Updated 10 months ago
- Spatial-Linked Alignment Tool☆82Updated last month
- Identify spatial domain☆63Updated last year
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆37Updated 2 years ago
- ☆23Updated last year
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆58Updated 8 months ago
- UniCell Deconvolve Paper☆10Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆57Updated last year
- domain adaptation of spatial and single-cell transcriptome☆25Updated 4 months ago
- ☆37Updated last year
- ☆29Updated last year
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆22Updated 3 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆18Updated 4 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆53Updated last year
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆30Updated 6 months ago
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆60Updated last year
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆34Updated last year