zhanglabtools / STAlignerLinks
STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages
☆24Updated last year
Alternatives and similar repositories for STAligner
Users that are interested in STAligner are comparing it to the libraries listed below
Sorting:
- Spatial-Linked Alignment Tool☆88Updated 9 months ago
- ☆122Updated 3 years ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆69Updated last year
- ☆41Updated last year
- ☆59Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆46Updated last year
- overview of spatial datasets☆76Updated last year
- Identify spatial domain☆83Updated 4 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆94Updated 7 months ago
- ☆134Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆75Updated 3 years ago
- ☆61Updated 11 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆59Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆37Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆63Updated 2 years ago
- ☆39Updated last year
- Single-cell biological network inference using a heterogeneous graph transformer☆76Updated 7 months ago
- ☆21Updated last year
- End-to-end analysis of spatial multi-omics data☆93Updated last month
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 3 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆48Updated 2 years ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆73Updated last year
- Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project☆84Updated last year
- ☆60Updated 2 years ago
- ☆30Updated 2 years ago
- Transformer for One-Stop Interpretable Cell-type Annotation☆145Updated last year
- domain adaptation of spatial and single-cell transcriptome☆27Updated last year
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆239Updated last year
- ☆123Updated last year
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆37Updated 4 months ago