fanglab / 6mASCOPELinks
☆8Updated 3 years ago
Alternatives and similar repositories for 6mASCOPE
Users that are interested in 6mASCOPE are comparing it to the libraries listed below
Sorting:
- ☆24Updated 3 months ago
- A method for measuring allele-specific telomere length and characterizing telomere variant repeat sequences from long reads.☆18Updated 2 weeks ago
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆22Updated 2 years ago
- ☆40Updated 3 months ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆48Updated 3 months ago
- A tutorial on structural variant calling for short read sequencing data☆38Updated 7 months ago
- RNA modification detection using Nanopore raw reads with Deep One Class classification☆19Updated 4 years ago
- deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads☆44Updated 2 years ago
- Master of Pores 2☆23Updated 6 months ago
- Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing☆16Updated 7 years ago
- Structural variant merging tool☆50Updated 9 months ago
- Clair3-RNA - a long-read small variant caller for RNA sequencing data☆23Updated 2 months ago
- WDL workflows for variant calling and assembly using ONT☆34Updated 2 weeks ago
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 2 years ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆52Updated 2 weeks ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆14Updated 2 years ago
- Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing☆37Updated 11 months ago
- Structural variant (SV) analysis tools☆36Updated 11 months ago
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆73Updated 2 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆29Updated last year
- PECAT, a phased error correct and assembly tool☆51Updated 2 weeks ago
- modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data☆16Updated last year
- Codes for the Iso-Seq variant-calling paper☆11Updated 2 years ago
- Computational pipeline for calling consensi on R2C2 nanopore data☆31Updated 3 years ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆55Updated 5 months ago
- HiFi-based caller for highly similar paralogous genes☆42Updated last week
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆37Updated 2 years ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆29Updated 3 weeks ago