pre-process illumina reads
☆19Oct 27, 2022Updated 3 years ago
Alternatives and similar repositories for illumiprocessor
Users that are interested in illumiprocessor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- software for UCE (and general) phylogenomics☆90Aug 15, 2026Updated 2 months ago
- UCE Bioinformatics Pipeline☆17Sep 29, 2025Updated last year
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆24May 30, 2023Updated 3 years ago
- Welcome to the offical webpage for the R-package ‘humboldt’☆20Sep 28, 2026Updated 2 weeks ago
- The original version of MGA has been archived - please see https://github.com/crukci-bioinformatics/mga2 instead.☆24Apr 15, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- NGSTools☆16Mar 3, 2017Updated 9 years ago
- A pipeline for de novo assembly of population-level sequence capture datasets.☆12Nov 6, 2018Updated 7 years ago
- phy-mer☆11Oct 12, 2017Updated 9 years ago
- Creates a target specific exome_full192.coverage.txt file required by MutSig☆21Sep 15, 2021Updated 5 years ago
- MITObim - mitochondrial baiting and iterative mapping☆118Dec 29, 2020Updated 5 years ago
- A Python interface to the BEDTools API using Cython☆28Mar 16, 2011Updated 15 years ago
- Gene orthologs for model organisms in a tidy data format☆16Sep 29, 2022Updated 4 years ago
- A program to detect denovo-variants using next-generation sequencing data.☆55Mar 30, 2020Updated 6 years ago
- BioDSL (pronounced Biodiesel) is a Domain Specific Language for creating bioinformatic analysis workflows.☆16Jul 30, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An ultrafast and memory efficient tool for phylogenomics☆27Apr 17, 2026Updated 6 months ago
- ☆12Aug 26, 2019Updated 7 years ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.☆14Nov 29, 2013Updated 12 years ago
- Process Illumina instrument data into SAM/BAM/CRAM files.☆10Jul 6, 2026Updated 3 months ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆12Apr 20, 2023Updated 3 years ago
- A Better Sequencing Simulator for Metagenomics☆21May 8, 2020Updated 6 years ago
- The SomaticSignatures package offers the framework for identifying mutational signatures of single nucleotide variants (SNVs) from high-t…☆23May 25, 2020Updated 6 years ago
- An ecological niche model workflow based on dismo☆50Aug 9, 2025Updated last year
- An Expectation-Maximization algorithm to infer mutational signatures☆27Nov 16, 2016Updated 9 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ellipsenm: Ecological niche’s characterization using ellipsoids☆19Oct 10, 2023Updated 3 years ago
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 13 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆22Aug 18, 2020Updated 6 years ago
- A multi-audio converter CLI that makes some bitful use of ffmeg in media format conversion☆12Sep 18, 2021Updated 5 years ago
- Quality Control of Next Generation Sequencing Data☆21Jun 16, 2025Updated last year
- A 3'-end adapter contaminant trimmer☆98Jan 23, 2018Updated 8 years ago
- ☆13Sep 18, 2017Updated 9 years ago
- Tool to easily install QIIME's dependencies on Linux systems☆35Oct 14, 2015Updated 11 years ago
- ☆40Sep 14, 2016Updated 10 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An R Package to build and simulate coalescent models☆21Sep 27, 2026Updated 2 weeks ago
- 업무자동화를 위한 Python 강의를 듣고 정리한 자료☆13Oct 10, 2017Updated 9 years ago
- Python program to generate NetworkX graphs from segmented images.☆15Apr 14, 2023Updated 3 years ago
- Tools for next-generation sequencing analysis☆90Jun 25, 2019Updated 7 years ago
- Best-fit model selection☆91Mar 21, 2024Updated 2 years ago
- ☆13Mar 25, 2017Updated 9 years ago
- Class project for Coursera's "Getting and Cleaning Data" class☆10Apr 19, 2014Updated 12 years ago