Alternatives and similar repositories for humboldt

Users that are interested in humboldt are comparing it to the libraries listed below

• soltislab / BotanyENMWorkshops
  Using Digitized Collections-Based Data in Research: Applications for Ecology, Phylogenetics, and Biogeography Botany 2025.
  ☆9Updated 2 months ago
• ivanlfm / BGB_BSM_multiple_trees
  Script to run ancestral range estimation + biogeographic stochastic maps over a sample of phylogenetic trees.
  ☆9Updated 7 months ago
• danlwarren / ENMTools
  ENMTools R Package
  ☆107Updated 3 months ago
• marlonecobos / kuenm
  kuenm: An R package for detailed calibration and construction of Maxent Ecological Niche Models.
  ☆64Updated last year
• cran / ecospat
   This is a read-only mirror of the CRAN R package repository. ecospat — Spatial Ecology Miscellaneous Methods. Homepage: https://www.uni…
  ☆17Updated 4 months ago
• wtesto / SpeciesOccurrenceMapping
  Species occurrence dot maps in R
  ☆21Updated 3 years ago
• bensutherland / eDNA_metabarcoding
  Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)
  ☆12Updated 2 years ago
• nmatzke / BioGeoBEARS
  BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts
  ☆67Updated 3 months ago
• jinyizju / V.PhyloMaker
  This R package makes phylogenetic hypotheses for a user-specified list of species at a faster speed than S.PhyloMaker
  ☆34Updated 3 years ago
• wxguillo / machuruku
  Machuruku
  ☆32Updated 5 months ago
• brshipley / megaSDM
  ☆23Updated last month
• fitzLab-AL / gdm
  R package for Generalized Dissimilarity Modeling
  ☆37Updated last month
• fmachados / grinnell
  Dispersal simulations based on ecological niches
  ☆16Updated last year
• AnushaPB / wingen
  Continuous mapping of genetic diversity
  ☆13Updated 2 months ago
• IUCNN / IUCNN
  Train neural networks based on geographic species occurrences, environmental data and existing IUCN Red List assessments to predict the …
  ☆27Updated 6 months ago
• eriqande / CKMRsim
  efficient sampling for close-kin mark recapture power estimation
  ☆14Updated last week
• KarasiewiczStephane / WitOMI
  ☆9Updated 5 years ago
• SHoeks / HomeRange
  This repository contains the latest version of the HomeRange data and R package.
  ☆11Updated 2 months ago
• gavinsimpson / ggvegan
  ggplot-based plots for vegan
  ☆116Updated 3 months ago
• daijiang / phyr
  Functions for phylogenetic analyses
  ☆32Updated last year
• shandongfx / workshop_maxent_R
  a brief tutorial on running Maxent in R
  ☆33Updated 7 years ago
• ptitle / epm
  An R package for the calculation of taxonomic, phenotypic and phylogenetic metrics across grid cells.
  ☆13Updated 3 weeks ago
• daijiang / rtrees
  rtrees: an R package to assemble phylogenetic trees from mega-trees
  ☆34Updated last month
• helixcn / sdm_r_packages
  A curated list of R packages used in species distribution modelling
  ☆50Updated 6 years ago
• RS-eco / traitdata
  R package for easy access to various ecological trait data
  ☆25Updated 2 years ago
• guiblanchet / HMSC
  Hierarchical modelling of species community
  ☆41Updated 5 years ago
• jebyrnes / multifunc
  A package for the analysis of how drivers affect multiple functions in a system.
  ☆16Updated 3 years ago
• jamiemkass / ENMeval
  R package for automated runs and evaluations of ecological niche models.
  ☆51Updated this week
• ecoinfor / U.Taxonstand
  R package for standardizing and harmonizing scientific names of plants and animals
  ☆22Updated last week
• HemingNM / ENMwizard
  Advanced Techniques for Ecological Niche Modeling Made Easy
  ☆15Updated last year