BioDSL (pronounced Biodiesel) is a Domain Specific Language for creating bioinformatic analysis workflows.
☆16Jul 30, 2018Updated 7 years ago
Alternatives and similar repositories for BioDSL
Users that are interested in BioDSL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Overlap assembler of paired-end DNA sequences generated by Illumina☆23Sep 2, 2016Updated 9 years ago
- A versatile simulation engine for stochastic population dynamics models.☆23Nov 11, 2022Updated 3 years ago
- ☆14Jan 20, 2016Updated 10 years ago
- High throughput sequencing analysis tools☆30Apr 21, 2025Updated 11 months ago
- Software for nanopore data analysis☆29Sep 10, 2014Updated 11 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- RapiDoc UI integration for R☆14Nov 17, 2023Updated 2 years ago
- A light-weight HTML lab notebook generator☆18Jun 16, 2023Updated 2 years ago
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- Scripts and tutorials on how to assemble individual microbial genomes from metagenomes☆80Jun 14, 2016Updated 9 years ago
- Toolkit for processing TAB-delimited format☆62Oct 10, 2024Updated last year
- pre-process illumina reads☆19Oct 27, 2022Updated 3 years ago
- Example Integration for Embedding Rust in Haskell☆35Sep 11, 2018Updated 7 years ago
- Simple merge for ActiveRecord objects and their associations.☆23Mar 8, 2016Updated 10 years ago
- Sample files for SSH + BasicAuth docker tutorial☆10Dec 16, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Mar 30, 2021Updated 5 years ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 6 months ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 5 years ago
- Testing module for Galaxy workflows☆10Jul 31, 2018Updated 7 years ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10May 29, 2017Updated 8 years ago
- Information and ideas for CarpentryCon☆20Aug 12, 2024Updated last year
- edit distance sequence tags and helpers☆12Feb 4, 2021Updated 5 years ago
- Tool for quick offline batch conversion of Genbank IDs or accessions to taxonomy strings☆14Jan 8, 2024Updated 2 years ago
- Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input…☆36May 1, 2022Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆38Sep 10, 2018Updated 7 years ago
- ☆25May 21, 2021Updated 4 years ago
- Portable MurmurHash Implementation☆11Feb 19, 2024Updated 2 years ago
- Merge 2 ActiveRecords, preserving attributes, associations and counters☆39May 20, 2013Updated 12 years ago
- Conference planning software☆12Feb 6, 2023Updated 3 years ago
- Web-based database system for flow cell management (incl. REST API)☆16Mar 7, 2024Updated 2 years ago
- SCREW: A Reproducible Workflow for Single-Cell Epigenomics☆10Oct 22, 2017Updated 8 years ago
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆33Oct 25, 2013Updated 12 years ago
- Should you cite this software?☆33Jul 2, 2020Updated 5 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Library implementation of "Generic description of well-scoped, well-typed syntaxes"☆12Mar 25, 2018Updated 8 years ago
- Big Browser watching your genome☆11Apr 10, 2016Updated 10 years ago
- BioPerl scripts and utilities☆11Sep 2, 2025Updated 7 months ago
- generate add to google calendar link☆16Oct 14, 2016Updated 9 years ago
- Extensible quality control dashboard built around FASTQ assessment.☆15May 17, 2019Updated 6 years ago
- The Modern::Perl CPAN Distribution☆27Jun 7, 2025Updated 10 months ago
- Windowed Adaptive Trimming for fastq files using quality☆228May 8, 2017Updated 8 years ago