Alternatives and similar repositories for bioInfograph

Users that are interested in bioInfograph are comparing it to the libraries listed below

• interactivereport / bioInfograph
  bioInfograph: an online tool to design and display multi-panel scientific figure interactively
  ☆11Updated 3 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated this week
• Core-Bioinformatics / ClustAssess
  Tools for assessing clustering robustness
  ☆28Updated 3 months ago
• interactivereport / OmicsView
  OmicsView: omics data analysis through interactive visual analytics
  ☆16Updated 3 years ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 4 years ago
• siddhartha-kar / clonal-hematopoiesis
  This is the repository accompanying the pre-print titled, "Genome-wide analyses of 200,453 individuals yield new insights into the causes…
  ☆13Updated 3 years ago
• broadinstitute / mix_seq_ms
  Code associated with MIX-seq manuscript
  ☆15Updated 5 years ago
• interactivereport / CellDepot
  CellDepot: A unified repository for scRNA-seq data and visual exploration. J Mol Biol. 2021 Dec 28:167425. doi: 10.1016/j.jmb.2021.167425…
  ☆24Updated 2 years ago
• slowkow / cellguide
  🧭 Navigate single-cell RNA-seq datasets in your web browser.
  ☆29Updated 2 years ago
• Bioconductor / ExperimentHub
  Client to access ExperimentHub resources
  ☆11Updated last month
• linnarsson-lab / cytograph
  Algorithms for single-cell analysis
  ☆29Updated 4 years ago
• caravagnalab / mobster
  Model-based tumour subclonal deconvolution using population genetics
  ☆33Updated 2 weeks ago
• klarman-cell-observatory / scPlot
  Single cell interactive plotting tools
  ☆24Updated 5 years ago
• yizhak-lab-ccg / RNA_MUTECt_WMN
  ☆25Updated 3 years ago
• AlexsLemonade / OpenScPCA-analysis
  An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
  ☆14Updated 2 weeks ago
• gerstung-lab / PCAWG-11
  Code accompanying "The evolutionary history of 2,658 cancers", Nature 578, 122–128 (2020)
  ☆17Updated 5 years ago
• ELELAB / MoonlightR
  ☆17Updated last year
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 4 years ago
• BUStools / BUS_notebooks_R
  R vignettes for processing BUS format single-cell RNA-seq files
  ☆21Updated 5 years ago
• immunogenomics / cdr3-QTL
  Trans-association between HLA and TCR-CDR3
  ☆19Updated 2 years ago
• julienroyulaval / DESeq2-MultiBatch
  Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2
  ☆17Updated 2 months ago
• taoshengxu / CancerSubtypes
  ☆17Updated 2 years ago
• genemine / iread
  iread
  ☆25Updated 4 years ago
• ebi-gene-expression-group / r-seurat-scripts
  Scripts to install as a Bioconda package for making workflows
  ☆18Updated last year
• bhklab / Xeva
  XEnograft Visualization & Analysis
  ☆11Updated 2 months ago
• const-ae / transformGamPoi
  Variance stabilizing transformation for Gamma Poisson distributed data
  ☆22Updated 2 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆29Updated 2 years ago
• keyuan / ccube
  Bayesian mixture models for estimating and clustering cancer cell fractions
  ☆24Updated 2 years ago
• broadinstitute / single_cell_classification
  Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles
  ☆30Updated 5 years ago
• mikelove / zinbwave-deseq2
  Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq
  ☆30Updated 4 years ago