☆32Jun 6, 2019Updated 6 years ago
Alternatives and similar repositories for DeepBehavior
Users that are interested in DeepBehavior are comparing it to the libraries listed below
Sorting:
- DeepGraphPose☆32Nov 27, 2022Updated 3 years ago
- Free, platform independent, behavior tracking software.☆144Jun 20, 2025Updated 9 months ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆84Mar 13, 2026Updated last week
- Analysis package for miniscope data☆15Dec 6, 2022Updated 3 years ago
- SIPEC: the deep-learning Swiss knife for behavioral data analysis☆47Sep 2, 2024Updated last year
- SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers☆355Updated this week
- Behavioral segmentation of open field in DeepLabCut, or B-SOID ("B-side"), is a pipeline that pairs unsupervised pattern recognition with…☆209Feb 9, 2024Updated 2 years ago
- Curate, visualize, annotate, and share your behavioral ephys data using Python☆33Oct 22, 2023Updated 2 years ago
- Acquiring images from allen brain atlas, mouse ISH experiments in R.☆17Mar 20, 2024Updated 2 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Jul 14, 2019Updated 6 years ago
- Janelia Animal Behavior Detector☆83Feb 27, 2026Updated 3 weeks ago
- End-user version of the Mouse Action Recognition System (MARS)☆80Mar 26, 2024Updated last year
- R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data …☆17Jul 15, 2015Updated 10 years ago
- This repository contains the code used for the paper "Molecular Atlas of the Adult Mouse Brain".☆16Feb 26, 2021Updated 5 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆41Jan 6, 2026Updated 2 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆39Nov 24, 2023Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆98Jul 19, 2024Updated last year
- Sample implementation of the MotionMapper behavioral analysis algorithms☆81Sep 8, 2020Updated 5 years ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Jun 18, 2020Updated 5 years ago
- Automated 3D cell detection in very large images☆226Mar 12, 2026Updated last week
- ☆20Dec 8, 2022Updated 3 years ago
- ☆121Aug 11, 2025Updated 7 months ago
- Affine and Regularized DEformative Numeric Transform (ardent) is a Python package for performing image registration using LDDMM.☆17Aug 26, 2020Updated 5 years ago
- Dimensionality-reduction and classification for morphology and electrophysiology☆12Sep 23, 2024Updated last year
- R Scripts to analyze deep lab cut point data and related data☆72Jan 25, 2023Updated 3 years ago
- An open-source ecosystem of hardware and software for head-fixed behavior☆13Sep 25, 2025Updated 5 months ago
- Neural network tracking code applied to single mice in open fields assays.☆10Feb 14, 2019Updated 7 years ago
- Online service for finding dendritic spines in microscope slide images☆11Oct 11, 2023Updated 2 years ago
- Source code of the Scalable Brain Atlas website (scalablebrainatlas.incf.org)☆15Mar 18, 2016Updated 10 years ago
- The framework for quantification of neuronal anatomy☆55Updated this week
- quantification of behavior across chronic social defeat stress☆11Jun 30, 2022Updated 3 years ago
- COS 429 final project completed by Adam Fisch and Max Shatkhin. Using image processing techniques including Eulerian Video Magnification …☆10Sep 25, 2015Updated 10 years ago
- A system for building mouse brain atlas from histology series☆11Aug 15, 2020Updated 5 years ago
- Advanced Tool for Labeling And Segmentation☆40Oct 21, 2024Updated last year
- A Primer on Motion Capture with Deep Learning:Principles, Pitfalls and Perspectives☆22Sep 11, 2021Updated 4 years ago
- Mouse grooming neural network training and inference code for single mice in open field assays.☆10Mar 29, 2021Updated 4 years ago
- GUI to run DeepLabCut on live video feed☆67Mar 13, 2026Updated last week
- Single-cell exploratory data analysis for RNA-Seq☆40Apr 24, 2021Updated 4 years ago
- Various scripts to support deeplabcut and what to do afterwards!☆161Jul 1, 2025Updated 8 months ago