BigNeuron / Code_and_Analysis_ToolsLinks
☆12Updated 3 years ago
Alternatives and similar repositories for Code_and_Analysis_Tools
Users that are interested in Code_and_Analysis_Tools are comparing it to the libraries listed below
Sorting:
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆67Updated 6 years ago
- 3-D imaging visualisation through slicing☆31Updated 10 months ago
- Repository for collecting materials from nwb hackathons☆24Updated last week
- Automated 3D brain registration with support for multiple species and atlases.☆138Updated 2 weeks ago
- ☆17Updated 2 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated last year
- Software package for neuron reconstruction and visualization☆40Updated 5 months ago
- Neuronal Morphology Analysis Tool☆108Updated 8 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- https://nutil.readthedocs.io/en/latest/☆13Updated this week
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated last year
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- motion correction☆17Updated 2 years ago
- Documentations of BigNeuron Project progress☆24Updated 9 years ago
- ☆41Updated 4 years ago
- Developing a Brain Atlas through Deep Learning☆53Updated 3 months ago
- Segmentation of anatomical structures in a common coordinate space☆34Updated 2 weeks ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆44Updated 3 months ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 7 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Updated 6 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Modern Neuroimaging Made Simple☆21Updated this week
- IaC codebase for the NeuroCAAS Platform☆38Updated last year
- A curated list of awesome Janelia software☆17Updated 8 months ago
- Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)☆29Updated 2 years ago
- ☆45Updated 5 years ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆57Updated 3 weeks ago
- Browser-based NWB visualization and DANDI exploration☆60Updated this week