BigNeuron / Code_and_Analysis_ToolsLinks
☆12Updated 3 years ago
Alternatives and similar repositories for Code_and_Analysis_Tools
Users that are interested in Code_and_Analysis_Tools are comparing it to the libraries listed below
Sorting:
- Automated 3D brain registration with support for multiple species and atlases.☆141Updated last week
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆67Updated 6 years ago
- Neuronal Morphology Analysis Tool☆108Updated 10 months ago
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…☆18Updated 3 years ago
- Repository for collecting materials from nwb hackathons☆24Updated last month
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Updated last year
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Updated 6 years ago
- Keras network for spike detection from calcium traces☆12Updated 5 years ago
- ☆41Updated 4 years ago
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated 2 years ago
- 3-D imaging visualisation through slicing☆31Updated 11 months ago
- ☆17Updated 2 years ago
- Developing a Brain Atlas through Deep Learning☆53Updated 4 months ago
- Brain flatmaps generation☆11Updated 3 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆43Updated 5 months ago
- Software package for neuron reconstruction and visualization☆40Updated 7 months ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated last month
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Updated 2 years ago
- Segmentation of anatomical structures in a common coordinate space☆34Updated 3 weeks ago
- motion correction☆17Updated 2 years ago
- IaC codebase for the NeuroCAAS Platform☆39Updated 2 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Deconvolution of calcium imaging data☆103Updated 11 months ago
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆36Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 5 years ago
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- A Python package for feature extraction of neural morphologies☆45Updated 2 months ago
- ☆16Updated 9 years ago