arnefmeyer / lnpy
Python code for estimation of linear-nonlinear model parameters
☆22Updated 3 years ago
Alternatives and similar repositories for lnpy:
Users that are interested in lnpy are comparing it to the libraries listed below
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆38Updated 5 years ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆19Updated 7 years ago
- ☆9Updated 4 years ago
- Pytorch implementation of LocaNMF☆34Updated 4 years ago
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆43Updated 5 years ago
- Recordings of 10k neurons during spontaneous behaviors☆50Updated 9 months ago
- Python tools for analysis of neurophysiology data☆36Updated last year
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆38Updated 3 months ago
- Coding exercises for Neural Data Science at CSHL in 2019☆28Updated 4 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆69Updated 4 years ago
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- YASS: Yet Another Spike Sorter☆65Updated 2 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆33Updated last year
- Pytorch implementation of lfads, and hierarchical extension☆26Updated 3 years ago
- Dimensionality reduction of spikes trains☆49Updated 3 years ago
- latent manifold tuning model / P-GPLVM☆12Updated 5 years ago
- Deconvolution of calcium imaging data☆86Updated last week
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆63Updated last year
- Neuroelectrophysiology object model and data analysis in Python.☆49Updated last month
- Tutorial☆10Updated 3 years ago
- WIP: Python port of Kilosort2☆50Updated last year
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- ☆46Updated 2 years ago
- ☆49Updated 4 years ago
- Motion estimation and registration of Neuropixels data☆14Updated 3 years ago
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆50Updated 3 years ago
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆43Updated last year
- A class for using ML algorithms for spike prediction☆59Updated 6 years ago
- This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …☆17Updated 7 years ago