arnefmeyer / lnpy
Python code for estimation of linear-nonlinear model parameters
☆22Updated 3 years ago
Alternatives and similar repositories for lnpy:
Users that are interested in lnpy are comparing it to the libraries listed below
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆37Updated 5 years ago
- Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood☆18Updated 7 years ago
- Python tools for analysis of neurophysiology data☆36Updated last year
- Pytorch implementation of LocaNMF☆35Updated 5 years ago
- ☆9Updated 4 years ago
- Recordings of 10k neurons during spontaneous behaviors☆50Updated last year
- CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations☆19Updated 3 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆45Updated 5 years ago
- A toolbox for inferring spikes from calcium traces.☆23Updated last year
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- Deconvolution of calcium imaging data☆91Updated 2 months ago
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆48Updated 2 weeks ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆33Updated last year
- Matlab interface for Latent Factor Analysis via Dynamical Systems (LFADS)☆49Updated 3 years ago
- Coding exercises for Neural Data Science at CSHL in 2019☆28Updated 4 years ago
- Tools for spike data analysis and visualization☆104Updated 2 years ago
- YASS: Yet Another Spike Sorter☆66Updated 2 years ago
- Analysis code for the results of the spikefinder challenge☆12Updated 7 years ago
- Schemata and libraries for neuroscientific data☆20Updated 5 months ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆92Updated 2 years ago
- A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.☆21Updated last year
- Tutorial☆10Updated 4 years ago
- Simulations illustrating the results of full-FORCE.☆13Updated 5 years ago
- Codebase for Cross-Spectral Factor Analysis (Gallagher et al., 2017)☆13Updated 4 years ago
- WIP: Python port of Kilosort2☆50Updated last year
- Fast Exact Spike Inference Via L0 Optimization☆15Updated 4 years ago
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆65Updated last year
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆68Updated 4 years ago
- SpikeForest -- spike sorting analysis for website -- version 2☆34Updated 2 years ago
- A quickstart guide to tensor decomposition☆70Updated 2 years ago