dervinism / minis
'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/currents in whole-cell patch clamp recordings and to estimate the quantal size in the central synapse.
☆9Updated 3 months ago
Alternatives and similar repositories for minis:
Users that are interested in minis are comparing it to the libraries listed below
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆16Updated last week
- Histology processing☆65Updated 3 weeks ago
- ☆11Updated 8 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 5 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- For displaying spherically corrected visual stimulus on a flat screen.☆9Updated 2 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- ☆51Updated 7 months ago
- A deep learning framework for synaptic event detection☆13Updated this week
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆48Updated last year
- Match suite2p ROIs between imaging sessions☆25Updated 5 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated 10 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- Fiber Photometry Modular Analysis Tool Suite☆37Updated 3 years ago
- Open-source stereotaxic coordinator☆15Updated 2 years ago
- ☆18Updated 3 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆86Updated 4 months ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- Fiber photometry analysis☆22Updated 3 months ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆39Updated last week
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- pyqt5 dependent applications for IBL sessions☆26Updated 3 weeks ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- Tools to work with Allen Inst CCF data in matlab☆130Updated last year
- miniscope analysis pipeline with interactive visualizations☆92Updated 8 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated last month
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆25Updated 3 weeks ago
- Microglia morphology quantification tool☆13Updated 3 years ago
- Registration of cells across sessions.☆74Updated 7 months ago