vector illustrations of BWT based searching on small strings
☆16Apr 29, 2019Updated 6 years ago
Alternatives and similar repositories for drawbwt
Users that are interested in drawbwt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- String Visualizer☆12Dec 18, 2025Updated 3 months ago
- FM-index representation of a de Bruijn graph☆26Aug 7, 2017Updated 8 years ago
- A tool for merging large BWTs☆24Nov 26, 2020Updated 5 years ago
- A cheatsheet for most common Stringology tasks☆14Apr 14, 2021Updated 4 years ago
- TU DOrtmund lossless COMPression framework☆19Sep 7, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Paper Collection for Stringologists☆17Mar 29, 2026Updated 2 weeks ago
- Simple succinct data structures (in Rust)☆54Updated this week
- Next Index to Query Kmer Intersection☆17Feb 1, 2023Updated 3 years ago
- ProphAsm – a rapid computation of simplitigs directly from k-mer sets☆25Feb 17, 2023Updated 3 years ago
- Implementation of the sacabench framework☆19May 15, 2021Updated 4 years ago
- Compact Tree Representation☆16Mar 16, 2017Updated 9 years ago
- ☆16Jun 22, 2023Updated 2 years ago
- Incremental construction of FM-index for DNA sequences☆72Jun 12, 2024Updated last year
- Optimal suffix sorting and LCP array construction for constant alphabets [IPL 2017]☆10Aug 17, 2018Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Implementation of eBWT using Prefix-free parse (PFP)☆14Jul 14, 2025Updated 8 months ago
- Bicriteria Data Compressor☆15Dec 9, 2017Updated 8 years ago
- Practical Dynamic de Bruijn Graphs☆18Oct 1, 2020Updated 5 years ago
- genome variation graphs constructed from HLA GRCh38 ALTs☆23Dec 24, 2021Updated 4 years ago
- ☆18Jul 9, 2018Updated 7 years ago
- A tool for visualizing the internal structures of morphological analyzer Sudachi☆18Jun 9, 2022Updated 3 years ago
- Space-Efficient, High-Performance Rank & Select Structures on Uncompressed Bit Sequences☆15Aug 7, 2018Updated 7 years ago
- A new lossless data compression algorithm☆12Nov 19, 2025Updated 4 months ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆47Jun 26, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Induced Suffix Array with LCP construction (Mirror)☆23Apr 24, 2012Updated 13 years ago
- Relative data structures based on the BWT☆12Apr 28, 2018Updated 7 years ago
- Inducing enhanced suffix arrays for string collections [DCC'16, TCS 2017]☆27Dec 2, 2025Updated 4 months ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate.☆21Dec 3, 2025Updated 4 months ago
- SIMD-parallel BLAST X-drop DP on sequence graphs☆24May 30, 2024Updated last year
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]☆17Aug 9, 2021Updated 4 years ago
- Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence informa…☆47Jun 7, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆14Oct 14, 2020Updated 5 years ago
- ☆24Apr 2, 2021Updated 5 years ago
- ☆12Sep 7, 2019Updated 6 years ago
- Python3 wrapper for GATB-Core.☆10Dec 16, 2017Updated 8 years ago
- Generate kmers/minimizers/hashes/MinHash signatures, including with multiple kmer sizes.☆24Jan 9, 2021Updated 5 years ago
- A lightweight suffix-sorting library enhanced with LCP construction☆13Mar 26, 2020Updated 6 years ago
- Comparing and combining multiple metagenomic datasets☆16Oct 12, 2022Updated 3 years ago