itomomoti / OnlineRlbwtLinks
Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.
☆15Updated 7 years ago
Alternatives and similar repositories for OnlineRlbwt
Users that are interested in OnlineRlbwt are comparing it to the libraries listed below
Sorting:
- Wavelet tree based on a fixed block boosting technique☆16Updated 4 years ago
- External memory suffix array construction using inducing☆11Updated 4 years ago
- R-Index-F Library for Pattern Matching☆13Updated 9 months ago
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 3 years ago
- Compact Tree Representation☆16Updated 8 years ago
- Implementation of eBWT using Prefix-free parse (PFP)☆14Updated 9 months ago
- LZ Double factor Factorization.☆11Updated 8 years ago
- TU DOrtmund lossless COMPression framework☆19Updated 8 months ago
- A cheatsheet for most common Stringology tasks☆15Updated 4 years ago
- linear time suffix array construction algorithm☆12Updated 8 years ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆65Updated 2 years ago
- Paper Collection for Stringologists☆17Updated last month
- C++ Implementation of Zip Trees☆14Updated 2 years ago
- 🔶 Compressed bitvector/container supporting efficient random access and rank queries☆43Updated 9 months ago
- A tool for merging large BWTs☆26Updated 4 years ago
- Dynamic succinct/compressed data structures☆112Updated last year
- Implementation of a Backpack Quotient Filter☆12Updated 10 months ago
- Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]☆15Updated 3 years ago
- Parallel Wavelet Tree and Wavelet Matrix Construction☆26Updated last year
- Ultra fast MSD radix sorter☆11Updated 4 years ago
- Relative data structures based on the BWT☆12Updated 7 years ago
- A space-efficient compressor based on the Re-Pair grammar☆11Updated 8 years ago
- SetSketch: Filling the Gap between MinHash and HyperLogLog☆49Updated 3 years ago
- Optimal suffix sorting and LCP array construction for constant alphabets [IPL 2017]☆9Updated 6 years ago
- A Space-Optimal Grammar Compression☆10Updated 4 years ago
- Bit packed vector of integral values☆27Updated 4 months ago
- Run-length compressed BWT with LZ77 sampled suffix array☆10Updated 3 years ago
- modified from gitlab.com/manzai/Big-BWT to support fasta files☆9Updated 4 months ago
- gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]☆27Updated 3 months ago
- COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)☆84Updated last year