ssayols / rrvgoView external linksLinks
Reduce + Visualize Gene Ontology
☆35Jul 25, 2025Updated 6 months ago
Alternatives and similar repositories for rrvgo
Users that are interested in rrvgo are comparing it to the libraries listed below
Sorting:
- An R-shiny package to analyse and visualise fungal gene expression data☆12Mar 14, 2024Updated last year
- Long read QC, assembly and scaffolding pipeline☆13Jul 13, 2020Updated 5 years ago
- ☆22Updated this week
- R package for testing and visualizing gene list overlaps☆19Aug 22, 2016Updated 9 years ago
- Simple tools for working with Hi-C data☆18Dec 19, 2018Updated 7 years ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Feb 12, 2016Updated 10 years ago
- ☆25Nov 29, 2022Updated 3 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- An integrated high performance bioinformatics toolkit☆23Apr 24, 2019Updated 6 years ago
- R Interface to the NCBI SRA metadata☆23Nov 19, 2018Updated 7 years ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆30Dec 13, 2024Updated last year
- An R package designed to demultiplex cell hashing data☆31Updated this week
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆33Mar 5, 2021Updated 4 years ago
- scripts to parse and analyse MCScanX collinearity output☆32Mar 3, 2020Updated 5 years ago
- Cluster-based analysis of CpG methylation☆13Jan 11, 2024Updated 2 years ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Jul 15, 2025Updated 6 months ago
- Core functionality of the CGAT code☆34Updated this week
- cgat-apps repository☆34Apr 9, 2025Updated 10 months ago
- Identify phage regions in bacterial genomes for masking purposes☆33Sep 5, 2019Updated 6 years ago
- Genome Annotation Pipeline☆43Aug 20, 2024Updated last year
- A command-line DSL budget manager☆13Oct 25, 2022Updated 3 years ago
- Implementation of multiplex Leiden for analysis of spatial omics data☆17Feb 2, 2026Updated last week
- Bioinformatics / Explore oligonucleotide composition similarity between assembly contigs or scaffolds to detect contaminant DNA.☆12Feb 27, 2019Updated 6 years ago
- Template repository for creating a UU styled Quarto presentation☆12Oct 29, 2025Updated 3 months ago
- SYNPHONI is a tool designed for reconstructing the dynamic evolution of syntenic relationships across all scales of phylogenetic distance…☆12May 7, 2023Updated 2 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Shark genomics & beyond - This is a central portal page for the project Squalomix, directed mainly by Molecular Life History Laboratory a…☆11Aug 15, 2025Updated 5 months ago
- pGWAS and functional filtering pipeline to identify candidate adaptive genetic traits in bacteria☆11Feb 6, 2018Updated 8 years ago
- Workflow and script for converting genomic coordinates using MUMmer output and CrossMap☆12Sep 1, 2018Updated 7 years ago
- Chatbot using AIML for android☆11Jun 6, 2019Updated 6 years ago
- ☆10Feb 21, 2020Updated 5 years ago
- Animal Network Toolkit Software R package source code☆10Sep 21, 2023Updated 2 years ago
- Snakemake pipeline for the preprocessing, alignment, QC, and quantification of spatial transcriptomics data - both short-read and long-re…☆11Nov 16, 2025Updated 2 months ago
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 5 years ago
- An R package to write Datalog queries and interact with a Datomic database☆11Aug 12, 2021Updated 4 years ago
- bioInfograph: an online tool to design and display multi-panel scientific figure interactively☆12Feb 15, 2022Updated 3 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Sep 22, 2025Updated 4 months ago
- Neural network classification of TE☆97Oct 9, 2025Updated 4 months ago
- Shiny app for proteomics data analysis☆14Jul 6, 2021Updated 4 years ago