code for the SE3 Transformers paper: https://arxiv.org/abs/2006.10503
☆584Apr 3, 2026Updated 5 months ago
Alternatives and similar repositories for se3-transformer-public
Users that are interested in se3-transformer-public are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Implementation of SE3-Transformers for Equivariant Self-Attention, in Pytorch. This specific repository is geared towards integration wit…☆335Aug 28, 2025Updated last year
- A modular framework for neural networks with Euclidean symmetry☆1,287Feb 13, 2026Updated 7 months ago
- Implementation of E(n)-Transformer, which incorporates attention mechanisms into Welling's E(n)-Equivariant Graph Neural Network☆226Jun 2, 2024Updated 2 years ago
- ☆163Jan 7, 2020Updated 6 years ago
- Implementation of E(n)-Equivariant Graph Neural Networks, in Pytorch☆534Dec 6, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Euclidean Neural Networks☆203Dec 19, 2020Updated 5 years ago
- ATOM3D: tasks on molecules in three dimensions☆319Mar 2, 2023Updated 3 years ago
- Implementation of the Equiformer, SE3/E3 equivariant attention network that reaches new SOTA, and adopted for use by EquiFold for protein…☆290Dec 17, 2024Updated last year
- Paper list for equivariant neural network☆1,098Aug 19, 2024Updated 2 years ago
- ☆549Feb 23, 2022Updated 4 years ago
- E(3) Steerable Graph Neural Network☆128Feb 10, 2023Updated 3 years ago
- A package to predict protein inter-residue geometries from sequence data☆222Sep 27, 2021Updated 5 years ago
- Attempt at reproduction of AlphaFold2☆99Jul 30, 2026Updated last month
- Generative Models for Graph-Based Protein Design☆292Dec 24, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An all-atom protein structure dataset for machine learning.☆365Mar 16, 2024Updated 2 years ago
- Implementation of Invariant Point Attention, used for coordinate refinement in the structure module of Alphafold2, as a standalone Pytorc…☆173Nov 25, 2022Updated 3 years ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆425Jul 3, 2023Updated 3 years ago
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,433Dec 16, 2025Updated 9 months ago
- Evolutionary Scale Modeling (esm): Pretrained language models for proteins☆4,170Feb 7, 2024Updated 2 years ago
- [ICLR 2023 Spotlight] Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphs☆290Feb 11, 2025Updated last year
- Open source code for TankBind. Galixir Tenchnologies☆187Nov 1, 2023Updated 2 years ago
- End-To-End Molecular Dynamics (MD) Engine using PyTorch☆718Apr 21, 2026Updated 5 months ago
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆164May 1, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- EquiDock: geometric deep learning for fast rigid 3D protein-protein docking☆261Sep 22, 2023Updated 3 years ago
- Code for Fold2Seq paper from ICML 2021☆50May 25, 2022Updated 4 years ago
- Repository for publicly available deep learning models developed in Rosetta community☆123Sep 18, 2021Updated 5 years ago
- To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released☆1,638Oct 29, 2022Updated 3 years ago
- Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…☆745Dec 11, 2022Updated 3 years ago
- Implementation of Torsional Diffusion for Molecular Conformer Generation (NeurIPS 2022)☆288Feb 10, 2024Updated 2 years ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Jun 18, 2021Updated 5 years ago
- Implementation of Lie Transformer, Equivariant Self-Attention, in Pytorch☆98Feb 19, 2021Updated 5 years ago
- EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein☆549Feb 19, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.☆779Jun 19, 2024Updated 2 years ago
- OmegaFold Release Code☆627Dec 12, 2022Updated 3 years ago
- This package contains deep learning models and related scripts for RoseTTAFold☆2,269Feb 15, 2024Updated 2 years ago
- Database of Interacting Protein Structures (DIPS)☆106Jan 26, 2024Updated 2 years ago
- trRosetta for protein design☆184May 15, 2021Updated 5 years ago
- Official implementation of "Generating 3D Molecules for Target Protein Binding" [ICML2022 Long Presentation]☆112Jul 20, 2023Updated 3 years ago
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,576May 2, 2025Updated last year