Alternatives and similar repositories for DeepAccNet

Users that are interested in DeepAccNet are comparing it to the libraries listed below

• jproney / AF2Rank
  ☆111Updated 2 years ago
• RosettaCommons / trRosetta2
  Repository for publicly available deep learning models developed in Rosetta community
  ☆117Updated 3 years ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆79Updated last year
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆131Updated last week
• dahjan / DMS_opt
  ☆71Updated 4 years ago
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆57Updated 2 years ago
• Graylab / deepH3-distances-orientations
  ☆35Updated 3 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆44Updated last month
• Liuxg16 / GeoPPI
  ☆86Updated 2 years ago
• j3xugit / RaptorX-3DModeling
  Note that current version does not include search of very large metagenome data. For some proteins, metagenome data is important. We will…
  ☆100Updated 3 years ago
• levinthal / Pallatom
  ☆109Updated 2 months ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆73Updated 4 years ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆68Updated 3 years ago
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆96Updated 2 years ago
• TencentAI4S / IgGM
  Official Implementation of IgGM
  ☆78Updated this week
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆74Updated 2 weeks ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆157Updated 2 years ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆57Updated 2 years ago
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆141Updated last year
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆61Updated 2 years ago
• yehlincho / BoltzDesign1
  ☆198Updated 2 weeks ago
• jertubiana / ScanNet
  ☆130Updated 2 months ago
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆161Updated 10 months ago
• ostrokach / proteinsolver
  Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.
  ☆60Updated 4 years ago
• vamships / PECAN
  Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
  ☆34Updated 5 years ago
• dina-lab3D / NanoNet
  ☆48Updated 2 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆105Updated 3 months ago
• dina-lab3D / CombFold
  ☆85Updated 11 months ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆123Updated 3 years ago