A web based tool to manage and automate the processing of publicly available datasets.
☆39Mar 16, 2021Updated 5 years ago
Alternatives and similar repositories for Labrador
Users that are interested in Labrador are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆99Apr 9, 2023Updated 3 years ago
- SeqMonk NGS visualisation and analysis tool☆51Mar 31, 2026Updated 3 months ago
- Random utility scripts for genomics data☆12Feb 22, 2021Updated 5 years ago
- Allele-specific alignment sorting☆62Jan 7, 2023Updated 3 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆22May 9, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A toolkit for working with ATAC-seq data.☆24Jan 22, 2026Updated 5 months ago
- Detects human contamination in bam files☆16Sep 10, 2020Updated 5 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Apr 16, 2016Updated 10 years ago
- 🐻⇔🐨 Calculate distance matrix from ChewBBACA cgMLST allele call tables☆29Jun 12, 2026Updated last month
- Customer workshop materials☆19May 13, 2026Updated 2 months ago
- Unfazed by genomic variant phasing☆28May 26, 2024Updated 2 years ago
- Pathogenicity prediction of bacterial genomes☆17Jun 27, 2018Updated 8 years ago
- Gene Set Enrichment Analysis Made Awesome☆12May 11, 2018Updated 8 years ago
- ☆57Mar 31, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 7 years ago
- Mapped QC analysis program☆44May 16, 2018Updated 8 years ago
- Master of Pores 2☆23Dec 4, 2024Updated last year
- horizontal pileup☆16Nov 11, 2022Updated 3 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Sep 20, 2017Updated 8 years ago
- Build contrasts for models defined with formulaic☆13Jul 13, 2026Updated last week
- ☆21Jul 12, 2016Updated 10 years ago
- Aggregate results from bioinformatics analyses across many samples into a single report.☆1,479Jun 29, 2026Updated 3 weeks ago
- A repository with scripts to run pipeline that are commonly used in the Meren Lab☆11Feb 7, 2018Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Apr 25, 2023Updated 3 years ago
- A flexible and fast sgRNA counter from FASTQ Files☆11Jun 17, 2026Updated last month
- HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq☆11Sep 1, 2015Updated 10 years ago
- Accelerating the deduplication and collapsing process for reads with Unique Molecular Identifiers (UMI). Heavily optimized for scalabilit…☆88Apr 1, 2024Updated 2 years ago
- ☆15May 16, 2019Updated 7 years ago
- create a gemini-compatible database from a VCF☆55Jan 5, 2021Updated 5 years ago
- Workflow management with Nextflow and nf-core☆32Jan 21, 2025Updated last year
- Web application to explore the Sequence Read Archive.☆223Jul 17, 2025Updated last year
- Mostly deprecated in favor of : https://github.com/hbc/bcbioRNASeq. Quality control, differential gene/transcript expression and pathway …☆26Dec 11, 2017Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆14Mar 14, 2019Updated 7 years ago
- NEFF Calculator and MSA File Converter☆15May 6, 2026Updated 2 months ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆25Apr 21, 2021Updated 5 years ago
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆29Jul 6, 2026Updated 2 weeks ago
- Process Illumina instrument data into SAM/BAM/CRAM files.☆10Jul 6, 2026Updated 2 weeks ago
- Genome Annotation for the Masses☆36Jul 9, 2017Updated 9 years ago
- A computation framework designed to detect differential junctions usage between two groups at single cell level☆13Feb 1, 2021Updated 5 years ago