Scripts for sincle cell multiome analysis
☆16Apr 6, 2022Updated 4 years ago
Alternatives and similar repositories for multiome_analysis
Users that are interested in multiome_analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Helper R scripts for multiple PERMANOVA tests, AICc script for PERMANOVA, etc.☆12Feb 26, 2024Updated 2 years ago
- Miscellaneous R script to wrangle data and generate visualizations☆17Aug 14, 2024Updated 2 years ago
- This repository contains my contributions to the #30DayChartChallenge☆10May 2, 2026Updated 4 months ago
- Module 4 for HKU Single-cell Workshop☆12Jul 6, 2021Updated 5 years ago
- All data and notebook for my 2020 scRNA-seq analysis workshop☆18Jul 27, 2020Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆14Jan 21, 2021Updated 5 years ago
- ☆388Oct 1, 2024Updated last year
- ☆17Sep 28, 2022Updated 3 years ago
- ☆12Sep 4, 2019Updated 7 years ago
- Identification and prediction of Parkinson disease subtypes and progression using machine learning in two cohorts☆14Jun 14, 2023Updated 3 years ago
- A single cell transcriptome atlas of the developing zebrafish hindbrain.☆14Jan 2, 2020Updated 6 years ago
- A toolbox for sparse contrastive principal component analysis☆12Feb 10, 2025Updated last year
- R package for pathway analysis in scRNA-seq data☆82Aug 17, 2024Updated 2 years ago
- ☆18Apr 11, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Deposited codes for snMultiome in human cortex manuscript☆14Aug 12, 2024Updated 2 years ago
- Workflow for analyzing MNase-seq data to generate nucleosome occupancy plots☆12Dec 1, 2022Updated 3 years ago
- Course on analysis of NGS data (RNA-Seq. and ATAC-Seq.) using Galaxy☆15May 24, 2021Updated 5 years ago
- Short course describing the considerations for a successful RNA-seq experiment☆19Mar 20, 2026Updated 6 months ago
- A jupyter notebook tutorial for making high-quality barplot figures from population structure analyses (Admixture, Structure) with Python…☆16Apr 17, 2025Updated last year
- R package to analyze single cell DNA sequencing data.☆11Aug 25, 2026Updated 3 weeks ago
- A listing of the commands, protocols and other notes that I take on a daily basis☆11Oct 25, 2023Updated 2 years ago
- ☆17Jun 12, 2024Updated 2 years ago
- Antique or modern atlas-like depictions of non-linear dimensionality reduction for single cell data☆18Jun 19, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Sanger Cellular Genetics single-cell ATAC-seq pipeline.☆13Aug 25, 2023Updated 3 years ago
- IKAP - Identifying K mAjor cell Population groups in single-cell RNA-seq analysis☆19Mar 16, 2020Updated 6 years ago
- Bioinformatic tools (R scripts) for the analysis of Absolute Quantification of Architecture (AQuA-HiChIP) style data.☆12Sep 12, 2025Updated last year
- Nonlinear Granger causality using machine learning techniques☆22Sep 8, 2023Updated 3 years ago
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆84Apr 16, 2026Updated 5 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆20Oct 25, 2024Updated last year
- ☆12Nov 7, 2022Updated 3 years ago
- Containerized workflow for analysis of human diabetic kidney disease by snRNA-seq and snATAC-seq☆17May 18, 2023Updated 3 years ago
- ☆15Jun 22, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- scripts for RNA-Seq analysis☆28Feb 20, 2022Updated 4 years ago
- How some homework solutions should work on some small examples☆11Aug 25, 2015Updated 11 years ago
- An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq☆42Mar 20, 2026Updated 6 months ago
- General notes and resources on how to analyze Spatial Transcriptomics data☆12Jun 20, 2023Updated 3 years ago
- Chromatin States Map in mouse embryonic stem cell☆20Apr 11, 2018Updated 8 years ago
- ☆18Mar 12, 2024Updated 2 years ago
- ☆13Jun 18, 2018Updated 8 years ago