Sphinx documentation source for a computational genomics tutorial.
☆36Dec 25, 2020Updated 5 years ago
Alternatives and similar repositories for genomics
Users that are interested in genomics are comparing it to the libraries listed below
Sorting:
- A collection of random and not so random online learning materials for biology, computation, and bioinformatics☆24Jul 30, 2017Updated 8 years ago
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 6 years ago
- A tool to extract and annotate genes from raw RNA-seq reads.☆10Dec 20, 2024Updated last year
- Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.☆10Mar 6, 2025Updated last year
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- ☆14Dec 27, 2022Updated 3 years ago
- RCSM(Recommended Connectivity-map Scoring Methods)☆17Aug 2, 2019Updated 6 years ago
- The wiki repo, with pull request enabled, for the rnaseq_tutorial☆26May 7, 2020Updated 5 years ago
- Course on analysis of NGS data (RNA-Seq. and ATAC-Seq.) using Galaxy☆15May 24, 2021Updated 4 years ago
- A very simple BLAST filtering pipeline☆19Mar 28, 2014Updated 11 years ago
- ☆10Apr 10, 2016Updated 9 years ago
- Bioinformatics analysis of SARS-CoV-2☆19Dec 28, 2023Updated 2 years ago
- ☆15Nov 28, 2022Updated 3 years ago
- Method for performing genome-wide association like studies on neighborhoods identified on biological networks relevant for the phenotype …☆17Jun 28, 2023Updated 2 years ago
- Testing hybridization using species trees☆10Aug 25, 2017Updated 8 years ago
- Standardize taxonomy across different data sources☆22Jun 7, 2025Updated 9 months ago
- autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the an…☆10Updated this week
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 3 years ago
- This repository contains the code developed for the NanOlympicsMod project.☆12Jan 29, 2024Updated 2 years ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated 6 months ago
- ☆16May 10, 2023Updated 2 years ago
- SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/☆23Sep 19, 2021Updated 4 years ago
- A scalable variant calling and benchmarking framework supporting both short and long reads.☆14Sep 28, 2025Updated 5 months ago
- Dock Multiple Ligands with AutoDock Vina with one Command☆11Jan 10, 2018Updated 8 years ago
- ☆29Apr 16, 2023Updated 2 years ago
- ☆27May 8, 2022Updated 3 years ago
- VirusScan Pipeline☆12Feb 7, 2026Updated last month
- CPANG19 - Computational PANGenomics (2019)☆12May 7, 2020Updated 5 years ago
- ☆13Dec 16, 2024Updated last year
- DEvis: an R package for aggregation and visualization of differential expression data☆19Dec 9, 2020Updated 5 years ago
- ☆11Sep 17, 2020Updated 5 years ago
- Tutorials on accessing public reference and genomic data☆32Feb 18, 2025Updated last year
- some useful scripts for working with genomics and sequencing data☆17Oct 31, 2019Updated 6 years ago
- New user☆42Oct 1, 2020Updated 5 years ago
- A reference viral database (RVDB)☆27Nov 30, 2018Updated 7 years ago
- Biol 4800: a course on reproducible research using R and some other fun bits, taught by Tad Dallas at Louisiana State University.☆21Dec 12, 2020Updated 5 years ago
- All kinds of NGS analysis pipeline☆12Oct 10, 2019Updated 6 years ago
- A tutorial on how to create bioinformatics pipelines as bash scripts, Makefiles and using tools like Nextflow.☆16Nov 14, 2022Updated 3 years ago
- A 3D genome data processing tutorial for ISMB/ECCB 2017☆52Jul 21, 2017Updated 8 years ago