dmis-lab / tbinetLinks
TBiNet: A deep neural network for predicting transcription factor binding sites using attention mechanism
☆25Updated 4 years ago
Alternatives and similar repositories for tbinet
Users that are interested in tbinet are comparing it to the libraries listed below
Sorting:
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆50Updated 4 years ago
- MHC-peptide class II interaction prediction, binding, presentation☆23Updated 3 years ago
- Supplementary data for the ACME algorithm☆23Updated 2 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Implementation of ReSimNet for drug response similarity prediction☆40Updated last year
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆52Updated 3 weeks ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Updated 3 years ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆40Updated 2 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 7 years ago
- ☆23Updated 2 years ago
- A repository for neural representational learning of RNA secondary structures☆32Updated 5 years ago
- ☆25Updated last year
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Updated 4 years ago
- [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …☆31Updated 3 years ago
- ☆17Updated 11 months ago
- ☆18Updated 3 years ago
- MHCAttnNet: Allele-Peptide predictions for class I & class II MHC alleles☆30Updated 4 years ago
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆12Updated 2 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Function prediction using a deep ontology-aware classifier☆84Updated 2 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 8 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆72Updated 2 years ago
- ☆21Updated 2 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 10 months ago
- Deep Exploration Networks - Diverse Deep Generative Models for DNA, RNA and Protein Sequences☆30Updated 3 years ago
- Python package and command line tool for epitope prediction☆52Updated last year
- ☆36Updated 7 months ago
- A sequence-based pan model for peptide-MHC I binding affinity prediction.☆26Updated 6 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Updated 4 years ago
- Graph-based representation learning method for protein function prediction☆24Updated this week