Alternatives and similar repositories for ReSimNet

Users that are interested in ReSimNet are comparing it to the libraries listed below

• pth1993 / DeepCE
  A deep learning framework for high-throughput mechanism-driven phenotype screening
  ☆51Updated 4 years ago
• PaccMann / paccmann_predictor
  PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…
  ☆54Updated 3 months ago
• dmis-lab / tbinet
  TBiNet: A deep neural network for predicting transcription factor binding sites using attention mechanism
  ☆25Updated 4 years ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆61Updated 2 years ago
• HYsxe / ACME
  Supplementary data for the ACME algorithm
  ☆23Updated 3 years ago
• hkmztrk / SMILESVecProteinRepresentation
  Source code for "A novel methodology on distributed representations of proteins using their interacting ligands"
  ☆28Updated 5 years ago
• drug2ways / drug2ways
  A Python package for drug discovery by analyzing causal paths on multiscale networks
  ☆28Updated last year
• GHDDI-AILab / Targeting2019-nCoV
  Information sharing portal about nCov/SARS/MERS for drug discovery
  ☆37Updated last year
• guangyu-zhou / MuPIPR
  ☆24Updated 4 years ago
• insilicomedicine / BiAAE
  Molecular Generation for Desired Transcriptome Changes with Adversarial Autoencoders
  ☆53Updated 5 years ago
• mikejhuang / PhageProtVec
  Amino Acid Embedding Representation as Machine Learning Features
  ☆20Updated 7 years ago
• cansyl / MDeePred
  Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery
  ☆28Updated 4 years ago
• jgmeyerucsd / drug-class
  comparing drug classification methods
  ☆22Updated 5 years ago
• babaling / DRPreter
  [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer
  ☆11Updated 2 years ago
• MahaThafar / Drug-Target-Interaction-Prediciton-Method
  This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…
  ☆27Updated 4 years ago
• stamakro / GCN-for-Structure-and-Function
  Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"
  ☆41Updated 2 years ago
• Shen-Lab / Drug-Combo-Generator
  Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding
  ☆30Updated 2 years ago
• mheinzinger / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆74Updated 4 years ago
• aced125 / AI_in_Drug_Discovery_Progress
  An up-to-date list of papers and code relating to progress in the burgeoning field of AI-Drug Discovery
  ☆43Updated 3 weeks ago
• GIST-CSBL / DeSIDE-DDI
  ☆13Updated 3 years ago
• ehsanasgari / dimotif
  Alignment-free Protein Motif Miner
  ☆16Updated 7 years ago
• ChengF-Lab / deepDTnet
  ☆32Updated 6 years ago
• hkmztrk / SMILESbasedSimilarityKernels
  ☆16Updated 7 years ago
• kiharalab / Emap2sec
  Emap2sec is a computational tool to identify protein secondary structures
  ☆16Updated last year
• PaccMann / paccmann_proteomics
  PaccMann models for protein language modeling
  ☆43Updated 4 years ago
• hashemifar / DPPI
  A convolutional neural network to predict PPI interactions
  ☆42Updated 7 years ago
• eugenebang / DREAMwalk
  The official code implementation for DREAMwalk in Python.
  ☆30Updated 2 years ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 8 months ago
• samoturk / mol2vec_notebooks
  Mol2vec notebooks for use with Binder service
  ☆29Updated 7 years ago