pth1993 / DeepCELinks
A deep learning framework for high-throughput mechanism-driven phenotype screening
☆51Updated 4 years ago
Alternatives and similar repositories for DeepCE
Users that are interested in DeepCE are comparing it to the libraries listed below
Sorting:
- A repository for neural representational learning of RNA secondary structures☆32Updated 5 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆54Updated 4 months ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- ☆18Updated last year
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- DeepTTC: a transformer-based model for predicting cancer drug response☆18Updated 2 years ago
- Paratope Prediction using Deep Learning☆61Updated 2 years ago
- A Python package for extracting protein sequence features☆62Updated 3 years ago
- ☆20Updated 3 years ago
- L1000 peak deconvolution based on Bayesian analysis☆26Updated 4 years ago
- Neural networks for deep mutational scanning data☆70Updated 6 months ago
- Multi-task and masked language model-based protein sequence embedding models.☆104Updated 4 years ago
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆13Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆74Updated 2 years ago
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆18Updated 3 years ago
- ☆110Updated 3 years ago
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated 2 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated 2 years ago
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆20Updated 2 years ago
- ☆22Updated 2 years ago
- Machine learning models for antibody sequences in PyTorch☆41Updated 4 years ago
- ☆25Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 4 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- MOLI: Multi-Omics Late Integration with deep neural networks for drug response prediction☆55Updated 5 years ago
- ☆25Updated last year
- ☆45Updated 8 months ago
- ☆36Updated 10 months ago
- ☆37Updated 2 years ago