Alternatives and similar repositories for alphabind

Users that are interested in alphabind are comparing it to the libraries listed below

• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆110Updated 3 weeks ago
• Kuhlman-Lab / evopro
  ☆81Updated last month
• AbSciBio / igdesign
  ☆41Updated 6 months ago
• levinthal / Pallatom
  ☆100Updated last month
• yehlincho / BoltzDesign1
  ☆170Updated last week
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆60Updated 2 weeks ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆72Updated 6 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆61Updated 7 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated last year
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆40Updated last week
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆69Updated 3 weeks ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆63Updated 5 months ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆49Updated 2 years ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆44Updated 7 months ago
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆56Updated 3 weeks ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆99Updated 2 months ago
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆91Updated 7 months ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆114Updated 4 months ago
• liuyf020419 / SCUBA-D
  ☆60Updated last year
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆66Updated 3 years ago
• amyxlu / plaid
  All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins
  ☆98Updated last month
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆78Updated last year
• danny305 / StabilityOracle
  ☆26Updated last year
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated last year
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆62Updated 5 months ago
• ai4protein / VenusREM
  🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)
  ☆83Updated last month
• dahjan / DMS_opt
  ☆69Updated 4 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 3 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆127Updated 2 months ago