Alternatives and similar repositories for alphabind

Users that are interested in alphabind are comparing it to the libraries listed below

• Kuhlman-Lab / evopro
  ☆94Updated 3 months ago
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆114Updated 3 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆78Updated 3 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆72Updated 5 months ago
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆133Updated 2 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆95Updated last month
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆146Updated last month
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆57Updated 7 months ago
• ELELAB / RosettaDDGPrediction
  ☆84Updated 2 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆70Updated 7 months ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆91Updated 7 months ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆76Updated 4 years ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆117Updated 3 months ago
• AbSciBio / igdesign
  ☆47Updated last year
• drhicks / Kejia_peptide_binders
  code for IDR binding paper 2025
  ☆67Updated 11 months ago
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆108Updated last week
• Mingchenchen / PPIFlow
  de novo design of high affinity biological binders
  ☆122Updated this week
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆152Updated 2 months ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆80Updated 2 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆87Updated 8 months ago
• SantiagoMille / germinal
  Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.
  ☆182Updated 2 months ago
• yehlincho / BoltzDesign1
  ☆236Updated last week
• dahjan / DMS_opt
  ☆74Updated 5 years ago
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆76Updated last month
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 3 years ago
• zhanghaicang / carbonmatrix_public
  ☆118Updated last month
• levinthal / Pallatom
  ☆133Updated 8 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆53Updated 4 months ago
• Exscientia / abodybuilder3
  ☆74Updated last year
• liuyf020419 / SCUBA-D
  ☆61Updated last year