☆23Jul 14, 2024Updated 2 years ago
Alternatives and similar repositories for RNAdegformer
Users that are interested in RNAdegformer are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Dec 6, 2022Updated 3 years ago
- A Python library containing RNA-related bioinformatics functions and classes.☆23Updated this week
- An ensemble-based approach for prediction of protein S-nitrosylation sites integrating supervised word embedding and embedding from prote…☆13May 8, 2024Updated 2 years ago
- Draw RNA secondary structures in python.☆54Jun 24, 2025Updated last year
- Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.☆111Nov 20, 2025Updated 8 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- a deep learning architecture for RNA-ligand binding sites prediction☆18Jan 21, 2024Updated 2 years ago
- ☆20Dec 5, 2024Updated last year
- ☆56Nov 14, 2025Updated 8 months ago
- Codon optimizer for tissue-specific expression☆17Sep 26, 2024Updated last year
- Custom fork of AlphaFold 3 enabling explicit modeling of crosslinks☆21Apr 21, 2026Updated 3 months ago
- Code associated with the publication 'Generative and predictive neural networks for the design of functional RNA molecules'☆15Apr 8, 2025Updated last year
- Neurally-derived Potts models for protein design, inspired by dTERMen☆15Aug 23, 2022Updated 3 years ago
- Python module to manipulate and visualize minimap2's cs tag☆11Jul 28, 2024Updated last year
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- wwPDB PDBx/mmCIF Dictionary☆10Updated this week
- A Nextflow pipeline that creates reliable, structure-informed MSAs of thousands of protein sequences which can supplement structural info…☆11Jul 14, 2026Updated last week
- Visualize global properties of large RNAs using GraphViz force-directed layout.☆24Sep 7, 2023Updated 2 years ago
- Alignment-free method to identify and analyse discriminant genomic subsequences within pathogen sequences☆10Feb 26, 2023Updated 3 years ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆70Jun 16, 2026Updated last month
- ☆15Nov 20, 2024Updated last year
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆13Jan 2, 2025Updated last year
- MiniMol is a 10M-parameters molecular fingerprinting model pre-trained on >3300 biological and quantum tasks☆49May 29, 2025Updated last year
- Eterna100-V2 benchmarking results and scripts☆14May 19, 2026Updated 2 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Contact map analysis for biomolecules; based on MDTraj☆49May 9, 2026Updated 2 months ago
- State of the art software for RNA sequence design. The first to solve the Eterna benchmark!☆16Jul 17, 2024Updated 2 years ago
- 让语雀作为静态博客的后端管理和编辑器,利用Webhook实现自动化部署。☆10Apr 9, 2022Updated 4 years ago
- Deep learning based prediction of pi-helices in protein sequences☆11Mar 24, 2023Updated 3 years ago
- Imitation learning from multiple experts☆13Aug 29, 2022Updated 3 years ago
- Hands-on with popular deep learning datasets and tasks☆13Apr 4, 2023Updated 3 years ago
- ☆17Oct 10, 2021Updated 4 years ago
- ☆92Sep 25, 2024Updated last year
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Apr 8, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆30Aug 8, 2025Updated 11 months ago
- RNAView identifies base pairs that are formed in nucleic acid structures and classifies them according to the system of Leontis and Westh…☆20Jul 11, 2024Updated 2 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆22Feb 21, 2025Updated last year
- ☆15Aug 3, 2025Updated 11 months ago
- BoostDiff - Inference of differential networks from gene expression data☆13Jan 11, 2024Updated 2 years ago
- Code repository of "Deep generative design of RNA family sequences"☆42Apr 8, 2026Updated 3 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆85Jul 19, 2026Updated last week