☆19Dec 16, 2024Updated last year
Alternatives and similar repositories for mimosa2
Users that are interested in mimosa2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Model-based Integration of Metabolite Observations and Species Abundances☆26Feb 21, 2020Updated 6 years ago
- Conversion software tool for producing both annotation and tree files for GraPhlAn☆11Feb 2, 2022Updated 4 years ago
- ☆21Dec 15, 2020Updated 5 years ago
- Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.☆149Dec 17, 2025Updated 5 months ago
- pathway based data integration and visualization☆48Mar 28, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…☆24Jun 9, 2021Updated 4 years ago
- Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for…☆165Apr 23, 2025Updated last year
- A Linear Discriminant Analysis Effect Size (LEfSe) wrapper.☆26Feb 2, 2017Updated 9 years ago
- ☆20Aug 10, 2022Updated 3 years ago
- Kraken(2) database based on the GTDB project☆28Dec 20, 2018Updated 7 years ago
- HUMAnN is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).☆244May 12, 2026Updated 2 weeks ago
- MetNormalizer is used to normalize large scale metabolomics data.☆22Mar 3, 2021Updated 5 years ago
- ☆16Jun 2, 2021Updated 4 years ago
- Code, unit tests, and tutorials for running PICRUSt2☆388Nov 27, 2025Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A snakemake workflow for metagenomic projects☆15Feb 16, 2023Updated 3 years ago
- Time-Course Multi-Omics data integration☆26Apr 9, 2024Updated 2 years ago
- Enumerating biosynthetic pathways in metabolic networks☆13Feb 5, 2025Updated last year
- Sparse Cooccurence Network Investigation for Compositional data☆25Feb 1, 2026Updated 3 months ago
- Differential abundance (DA) and correlation analyses for microbial absolute abundance data☆136Apr 27, 2026Updated 3 weeks ago
- Neural networks for microbe-metabolite interaction analysis☆131Nov 4, 2022Updated 3 years ago
- DAS Tool☆173May 2, 2024Updated 2 years ago
- A Snakemake-based pipeline for gene mapping in Triticeae.☆11Mar 5, 2022Updated 4 years ago
- wrapper functions to use ggstatsplot functions as a module in jamovi☆10May 3, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Convert GTDB taxonomy to NCBI taxdump format☆75Aug 24, 2023Updated 2 years ago
- PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a …☆13Dec 12, 2024Updated last year
- Statistical analysis for sparse high-throughput sequencing☆73Dec 17, 2024Updated last year
- ☆15Mar 10, 2026Updated 2 months ago
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- Robust Aitchison PCA from sparse count data☆37Aug 17, 2022Updated 3 years ago
- ☆17Dec 5, 2017Updated 8 years ago
- R and python scripts for correlation-based network analysis☆61May 17, 2020Updated 6 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆10Apr 23, 2020Updated 6 years ago
- Microbial ecological network visualization clustering☆149Nov 20, 2025Updated 6 months ago
- ☆11May 25, 2025Updated last year
- ☆11Jun 26, 2020Updated 5 years ago
- ☆84Sep 13, 2023Updated 2 years ago
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆471Jul 28, 2023Updated 2 years ago
- Genomic Selection using Neural Networks implemented in TensorFlow☆10Aug 22, 2018Updated 7 years ago