czi-ai / rbioLinks
Public repo for rbio, a biologically-informed reasoning model trained on virtual cell models as verifiers
☆121Updated 2 weeks ago
Alternatives and similar repositories for rbio
Users that are interested in rbio are comparing it to the libraries listed below
Sorting:
- Tahoe-x1 is a single cell foundation model designed for gigascale datasets☆114Updated last week
- ☆133Updated 8 months ago
- Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…☆84Updated 4 months ago
- ☆99Updated 2 months ago
- BioReason: Incentivizing Multimodal Biological Reasoning within a DNA-LLM Model | NeurIPS '25☆326Updated 2 weeks ago
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆81Updated last month
- ☆93Updated last month
- ☆85Updated 3 months ago
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆91Updated 5 months ago
- State is a machine learning model that predicts cellular perturbation response across diverse contexts☆464Updated 3 weeks ago
- KGWAS: novel genetics discovery enabled by massive functional genomics knowledge graph☆75Updated 9 months ago
- Comprehensive suite for evaluating perturbation prediction models☆112Updated last month
- GeneCompass☆101Updated last week
- 🏃 The go-to single-cell Foundation Model☆123Updated last week
- Inference and numerics for multi-hybrid AI model architectures☆84Updated 3 months ago
- CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets☆156Updated last week
- RNA-seq prediction with deep convolutional neural networks.☆213Updated 3 months ago
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆57Updated 6 months ago
- Computational Optimization of DNA Activity (CODA)☆65Updated 8 months ago
- Pretraining infrastructure for multi-hybrid AI model architectures☆195Updated 4 months ago
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆127Updated last year
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆60Updated last year
- CRISPSR-GPT LLM Agent Public Welcome Page☆125Updated 3 months ago
- ☆76Updated last year
- A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner☆95Updated last month
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆98Updated last month
- Contextual AI models for single-cell protein biology☆96Updated 9 months ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆99Updated last year
- ☆118Updated 9 months ago
- Sample models for the PhysiCell grammar / rules paper☆28Updated 4 months ago