☆14Mar 7, 2024Updated 2 years ago
Alternatives and similar repositories for immunotherapy_scRNAseq_papers
Users that are interested in immunotherapy_scRNAseq_papers are comparing it to the libraries listed below
Sorting:
- coding exercise using TCGA immune infiltration data☆11Feb 2, 2024Updated 2 years ago
- This repository contains the scripts developed for the analysis of CRC samples processed with the 10x VISIUM Spatial Transcriptomics tech…☆11Feb 7, 2023Updated 3 years ago
- ☆28Apr 5, 2025Updated 11 months ago
- A collection of bioinformatics data analysis notebooks focused on providing examples of current best practices in sequencing data analysi…☆16Jan 14, 2026Updated last month
- published papers with a lot of data☆74Apr 5, 2025Updated 11 months ago
- ☆23Jan 12, 2026Updated last month
- Bioinformatics one-liner for 100 days☆49Apr 9, 2024Updated last year
- tools and notes for long reads analysis☆24Mar 31, 2025Updated 11 months ago
- some resources for startup companies☆61Nov 1, 2023Updated 2 years ago
- RNAseq pipeline based on snakemake☆26Mar 8, 2023Updated 2 years ago
- ☆38Jul 26, 2016Updated 9 years ago
- ☆10May 31, 2022Updated 3 years ago
- 单细胞测序的高级教程☆11Apr 12, 2021Updated 4 years ago
- ☆12Apr 29, 2024Updated last year
- Cytofin-an R package for CyTOF data integration☆12Jan 13, 2022Updated 4 years ago
- ☆13Mar 17, 2019Updated 6 years ago
- Biwhitened PCA☆14Feb 3, 2026Updated last month
- Sample Level Analysis of Pathway Alteration Enrichments☆10Jan 21, 2019Updated 7 years ago
- general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!☆12Nov 20, 2024Updated last year
- ☆13May 31, 2025Updated 9 months ago
- Code for the paper on the ICR immune signatures and prognostic significance pan-cancer (TCGA)☆10Jul 22, 2020Updated 5 years ago
- Central repository for the Multiplexed Tissue Imaging Workshop 2023.☆10Jan 9, 2023Updated 3 years ago
- SIMS: Scalable, Interpretable Models for Cell Annotation of large scale single-cell RNA-seq data☆10Dec 3, 2025Updated 3 months ago
- ☆14Jan 21, 2021Updated 5 years ago
- Single-cell immune repertoire trajectory analysis in R☆11Aug 8, 2025Updated 6 months ago
- Notebooks to accompany sofroniew-vlasov-2015☆10May 18, 2019Updated 6 years ago
- An open platform for capturing, integrating, storing, and sharing biological knowledge in and across organizations.☆24Jan 28, 2017Updated 9 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- ☆12Mar 5, 2024Updated 2 years ago
- Notebooks for CPA figures☆14Dec 9, 2022Updated 3 years ago
- Do we need rebalancing strategies? A theoretical and empirical study around SMOTE and its variants (Sakho, Malherbe and Scornet; 2024)☆11Sep 2, 2025Updated 6 months ago
- scNOVA : Single-Cell Nucleosome Occupancy and genetic Variation Analysis☆11Jul 29, 2023Updated 2 years ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- Python xml.sax☆10Mar 19, 2019Updated 6 years ago
- R/Bioconductor package for working with 10x scATACseq data☆42Nov 13, 2023Updated 2 years ago
- ☆13Dec 15, 2021Updated 4 years ago
- A Rmarkdown to SoS Notebook converter☆11Oct 22, 2021Updated 4 years ago
- Archive of original RNAseq.wiki tutorial that accompanied PLoS Comp Bio paper☆13Nov 13, 2016Updated 9 years ago
- ☆13Nov 10, 2022Updated 3 years ago