cran / PopGenomeLinks
This is a read-only mirror of the CRAN R package repository. PopGenome — An Efficient Swiss Army Knife for Population Genomic Analyses
☆16Updated 5 years ago
Alternatives and similar repositories for PopGenome
Users that are interested in PopGenome are comparing it to the libraries listed below
Sorting:
- Genome-wide de novo genotyping with 2bRAD☆23Updated 2 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- A package for population structure inference from RAD-seq data☆33Updated 4 years ago
- ☆43Updated 4 months ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- An Efficient Swiss Army Knife for Population Genomic Analyses in R☆37Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆60Updated 9 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- HybSeq Target Capture of 353 Protein Coding Genes in Any Angiosperm☆19Updated 2 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆26Updated 5 years ago
- Infer demographic history with the Moran model☆47Updated last month
- Module for analysing admixture graphs☆28Updated 7 years ago
- findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a ske…☆38Updated last year
- Automated de novo assembly of whole chloroplast genomes.☆46Updated 10 months ago
- Methods for examining PCA locally along the genome.☆83Updated 11 months ago
- A program for the Maximum-likelihood analysis of population genomic data.☆29Updated 4 years ago
- ☆11Updated 3 years ago
- ☆26Updated 5 months ago
- A statistical framework for ploidy estimation using NGS short-read data☆60Updated 7 years ago
- A pipeline for performing genome-wide association tests for bacterial genomes.☆27Updated 7 years ago
- ☆29Updated last year
- A Windows Graphical Platform for Batch Manipulation of Tremendous Amount of Sequence Data☆30Updated 4 years ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Updated 3 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Scripts to calculate population genetics statistics☆55Updated 7 years ago
- ☆16Updated 4 years ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- Software package for in silico simulation and testing of double digest RADseq experiments.☆19Updated 4 years ago
- Repository for speciation genomics website☆26Updated last year