☆24Dec 7, 2023Updated 2 years ago
Alternatives and similar repositories for MCFA
Users that are interested in MCFA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for distilling functional annotations of bacterial genomes and metagenomes☆12Feb 27, 2025Updated last year
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- FLYCOP (FLexible sYnthetic Consortium OPtimization)☆12Sep 24, 2018Updated 8 years ago
- R Shiny tool to interactively visualize and analyze antibody repertoires☆11Jan 8, 2024Updated 2 years ago
- Apply AI-based trait prediction from BacDive to your own genomes.☆16Nov 12, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The standard for open-source GEMs on GitHub☆22Oct 5, 2026Updated 2 weeks ago
- ☆15Dec 26, 2022Updated 3 years ago
- R package with Classes and Methods for Fast Memory-Efficient Boolean Selections☆13May 6, 2025Updated last year
- An R/Shiny platform for genome-wide SNP analysis and visualization with AI-assisted features☆15May 3, 2026Updated 5 months ago
- Lightweight Alignment Based Resolution of Alternative Three Prime Ends☆11Jan 26, 2024Updated 2 years ago
- Benchmark structural variant calls against a reference set☆18Jan 26, 2026Updated 8 months ago
- Bioconductor-friendly bindings for Parquet files.☆11Jun 24, 2025Updated last year
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆65Oct 12, 2026Updated last week
- Leveraging 'fst' for fast on-disk matrices☆11Jan 23, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An R factor backed by a raw vector rather than an integer vector.☆11Sep 6, 2021Updated 5 years ago
- 🐶 hlabud: HLA genotype analysis in R☆19Apr 11, 2025Updated last year
- ☆23Aug 28, 2020Updated 6 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 27, 2026Updated 6 months ago
- Kmer based genotyper for short reads.☆23Oct 19, 2021Updated 5 years ago
- A method to detect polygenic adaptation in an admixture graph☆12Feb 22, 2018Updated 8 years ago
- Scripts to build high-quality genome-scale metabolic model by using a deep neural network to guide gapfilling☆19Oct 14, 2026Updated last week
- WES HLA Typing based on multiple alternative tools☆18Mar 8, 2021Updated 5 years ago
- WoLFPSort v0.2 source code as original server no longer available☆10Apr 6, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Implementation of SpliceAI, Illumina's deep neural network to predict variant effects on splicing, in PyTorch.☆15Mar 3, 2023Updated 3 years ago
- Classification of Single cells by Transfer Learning☆12Oct 11, 2025Updated last year
- R package for scMultiMap, a statistical method for cell-type-specific mapping of enhancer-gene pairs with single-cell multimodal data☆10Jun 12, 2025Updated last year
- Superfast betabinomial fit implemented in Cython☆15Oct 21, 2025Updated last year
- TMARKER is a software for cancer cell nucleus detection, segmentation, counting, and classification.☆14Feb 22, 2017Updated 9 years ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Sep 6, 2016Updated 10 years ago
- Clone of the Bioconductor repository for the TileDBArray package.☆11Apr 10, 2026Updated 6 months ago
- HDF5 datasets as array-like objects in R☆13Aug 27, 2026Updated last month
- ☆13Apr 16, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PRS-on-SPARK☆18Feb 4, 2021Updated 5 years ago
- Knockoff-based analysis of GWAS summary statistics data☆11Updated this week
- Various multi-trait association tests in R☆11Oct 30, 2018Updated 7 years ago
- A rapido and lightweight method for PGS computation☆14Aug 20, 2026Updated 2 months ago
- High-performance sparse data representation and manipulation in R☆13Oct 16, 2026Updated last week
- An R package for adaptive sum of powered score test(ASPU) in genetic association studies.☆12Jun 28, 2021Updated 5 years ago
- GPRuler, an open-source computational framework to automate the reconstruction process of Gene-Protein-Reaction (GPR) rules within metabo…☆13Oct 11, 2022Updated 4 years ago