krishnanlab / RNAseq_coexpressionLinks
In-depth analysis of normalization and transformation methods for building coexpression networks from RNA-seq data.
☆15Updated last year
Alternatives and similar repositories for RNAseq_coexpression
Users that are interested in RNAseq_coexpression are comparing it to the libraries listed below
Sorting:
- Merge fastq files split over lanes☆20Updated 7 years ago
- Time-Course Multi-Omics data integration☆25Updated last year
- ☆29Updated 8 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- workshop website on readthedocs☆19Updated this week
- A network-based approach for exon set enrichment☆15Updated 2 months ago
- a tool for summarizing and integrating gene-set analysis results☆16Updated 10 months ago
- ☆38Updated 2 years ago
- Visual exploratory analysis of gene expression data☆43Updated last month
- An R interface to the MEME Suite☆50Updated last week
- Statistical power studies for multi-omics experiments.☆32Updated 5 months ago
- ☆32Updated last year
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated 3 weeks ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated 3 weeks ago
- RNAseq pipeline based on snakemake☆26Updated 2 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- binned motif enrichment analysis and visualisation☆40Updated last month
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆39Updated 2 weeks ago
- Shiny GUI application for genomics meta-analysis☆22Updated 4 years ago
- documentation for trackViewer☆29Updated 5 years ago
- An R for fast and flexible DNA methylation analysis☆31Updated this week
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- ☆29Updated 11 months ago
- R package wrapping bedtools☆41Updated 3 months ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆54Updated 3 weeks ago
- 🧬 Gene analysis toolkit based on R☆57Updated 5 months ago
- Transcript quantification import with automatic metadata detection☆68Updated last month
- Motif manipulation functions for R.☆28Updated 2 months ago
- Workshop • Analysis of RNA-seq data☆36Updated last year