aafkegros / MicroscopyNodesLinks
Loading and handling microscopy data in blender
☆146Updated last month
Alternatives and similar repositories for MicroscopyNodes
Users that are interested in MicroscopyNodes are comparing it to the libraries listed below
Sorting:
- ☆39Updated last year
- ☆51Updated 7 months ago
- A napari plugin for clustering objects according to their properties.☆88Updated last week
- A napari plugin for making animations☆89Updated 3 weeks ago
- Bringing the ZeroCostDL4Mic experience running everywhere via easy-to-install docker images☆83Updated last month
- Image reading, metadata management, and image writing for Microscopy images in Python☆110Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated last month
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆174Updated 7 months ago
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆89Updated 3 weeks ago
- Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy☆85Updated 3 weeks ago
- ☆36Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 7 months ago
- Lectures for a napari training course☆50Updated 2 years ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 4 months ago
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆157Updated 3 weeks ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 3 weeks ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last month
- Cell tracking and segmentation software☆162Updated 2 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆71Updated 3 weeks ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆99Updated last week
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 8 months ago
- ☆41Updated last week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆61Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆83Updated last month
- Cookiecutter for napari plugins☆71Updated last year
- Accurate and efficient spot detection for microscopy data☆113Updated 3 weeks ago
- Browse your OMERO database from within napari.☆39Updated 3 weeks ago
- Pure Python library for reading NIS Elements ND2 images and metadata☆48Updated 11 months ago
- Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more☆151Updated 2 months ago