maweigert / spimagine
GPU accelerated volume rendering / processing in Python
☆117Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for spimagine
- GPU accelerated image/volume processing in Python☆107Updated 3 weeks ago
- FluoRender is an interactive rendering tool for confocal microscopy data visualization.☆41Updated this week
- Library for producing and processing on the Adaptive Particle Representation (APR).☆48Updated last week
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 5 years ago
- Create 3D/4D animations using a natural language-based syntax☆58Updated last year
- TensorFlow Deconvolution for Microscopy Data☆90Updated 2 years ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆49Updated 2 months ago
- The python-microscopy environment - an open-source package for light microscopy☆84Updated 2 weeks ago
- A napari plugin for making animations☆79Updated 2 months ago
- ☆34Updated last month
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆23Updated 4 years ago
- Binary releases of Vaa3D and related software components☆43Updated 11 months ago
- Things we use regularly☆29Updated 2 months ago
- Create movies from series of key-frames in napari.☆38Updated 3 years ago
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆44Updated last year
- GPU accelerated beam propagation tools for biological light tissue simulations☆35Updated 6 years ago
- Automatically exported from code.google.com/p/iocbio☆17Updated 9 years ago
- Data backend for fast proofreading of cell segmentations in connectomics datasets☆23Updated last month
- ☆20Updated 5 months ago
- A python script editor plugin for napari☆11Updated last year
- A napari plugin for itk-elastix☆38Updated 4 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated 2 months ago
- Connecting Java/ImgLib2 + Python/NumPy☆31Updated last month
- GPU accelerated 3D image deconvolution using CUDA☆34Updated 3 months ago
- python functions for simulating optical transfer functions☆71Updated 7 months ago
- Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.☆44Updated this week
- Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.☆48Updated 3 months ago
- ☆31Updated 6 months ago
- CuPy implementations of image and signal processing functions from NumPy, SciPy and scikit-image☆45Updated 3 years ago
- Python module for registering and fusing multi-view microscopy data☆23Updated last year