☆23Mar 13, 2024Updated 2 years ago
Alternatives and similar repositories for EPySeg
Users that are interested in EPySeg are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- StarDist plugin for ImageJ☆32May 9, 2022Updated 4 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 8 months ago
- Python program to generate NetworkX graphs from segmented images.☆15Apr 14, 2023Updated 3 years ago
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Oct 26, 2026Updated last week
- ☆13Apr 27, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fiji plugin to use Cellpose with Appose☆10Updated this week
- Napari gaming☆17Dec 22, 2021Updated 4 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 3 months ago
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆26Jun 13, 2024Updated 2 years ago
- Reduce the size of existing CZI-documents by converting them to zstd-compressed CZI documents☆24Sep 9, 2026Updated last month
- Java implementation of Appose ☕☆15Oct 20, 2026Updated 2 weeks ago
- ☆13Mar 26, 2025Updated last year
- GPU-accelerated Image Processing library for Python☆66Oct 22, 2026Updated last week
- Image registration and ROI matching for microscopy images using nuclei constellations☆17Oct 26, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- simple package for augmentation of n-dimensional arrays☆33Aug 10, 2023Updated 3 years ago
- 🌸 Breast epithelium segmentation through IHC-guided supervision☆11Apr 23, 2024Updated 2 years ago
- ☆21Aug 17, 2023Updated 3 years ago
- Annotate microscopy images for CNN classifier☆11May 31, 2022Updated 4 years ago
- Imagej toolset to ease hyperstacks visualization and handling☆23Feb 9, 2026Updated 8 months ago
- GPU-accelerated image processing in QuPath☆16Oct 23, 2021Updated 5 years ago
- ☆17Sep 13, 2024Updated 2 years ago
- ☆22Aug 24, 2026Updated 2 months ago
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆17Jun 2, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆103Oct 13, 2026Updated 2 weeks ago
- Time arrow prediction for live-cell microscopy☆22Jun 17, 2024Updated 2 years ago
- CLIJ is deprecated. Visit CLIJ2☆57Jun 12, 2021Updated 5 years ago
- Various scripts written for image analysis utilities☆12Oct 3, 2025Updated last year
- ☆23Mar 26, 2021Updated 5 years ago
- Interacting Active Surfaces☆10Jul 12, 2022Updated 4 years ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- Napari plugin for the reconstruction of Structured Illumination microscopy (SIM) data☆13Nov 4, 2023Updated 2 years ago
- ☆12May 26, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A list of awesome bioimage analysis challenges☆10Feb 1, 2022Updated 4 years ago
- Speed up coding/extending image analysis in Python.☆37Oct 12, 2026Updated 3 weeks ago
- Modern Bio-Formats wrapper with clean lazy Python API☆24Oct 26, 2026Updated last week
- Guides and code for 3D nuclear instance segmentation☆25Dec 2, 2025Updated 11 months ago
- Dataset EXploration & Processing☆33May 11, 2023Updated 3 years ago
- Track and lineage visualization with btrack and Napari☆46Sep 29, 2025Updated last year
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆13Jan 24, 2022Updated 4 years ago