Web Image Processing Pipeline (WIPP)
☆27Dec 19, 2025Updated 9 months ago
Alternatives and similar repositories for WIPP
Users that are interested in WIPP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Aug 16, 2024Updated 2 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated last month
- Optimize image processing workflows in napari☆17May 1, 2025Updated last year
- ☆15Jul 29, 2022Updated 4 years ago
- GIve easy, high-level access to ome-zarr fileset☆24Sep 22, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Framework for image and flow cytometry analysis☆33Mar 17, 2026Updated 6 months ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated last year
- ilastik plugin for napari☆15Mar 2, 2026Updated 6 months ago
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- Evaluating the quality of a cell segmentation method without reference.☆13Jul 26, 2025Updated last year
- A fully scalable robust image feature extraction library.☆30Updated this week
- Command-line client for Fractal☆49Updated this week
- Python program to generate NetworkX graphs from segmented images.☆14Apr 14, 2023Updated 3 years ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆18Nov 10, 2022Updated 3 years ago
- ngio is a Python library to streamline OME-Zarr image analysis workflows.☆52Updated this week
- Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow☆26Jul 22, 2024Updated 2 years ago
- A minimal dependency napari plugin giving access to scikit-image functions☆24Sep 4, 2026Updated 2 weeks ago
- Modern Bio-Formats wrapper with clean lazy Python API☆23Jun 25, 2026Updated 3 months ago
- Dataset EXploration & Processing☆33May 11, 2023Updated 3 years ago
- ☆24Jul 22, 2026Updated 2 months ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆19Apr 8, 2025Updated last year
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆58Nov 13, 2025Updated 10 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Accelerated CellStitch for 3D labeling of anisotropic image stacks☆15Mar 1, 2026Updated 6 months ago
- A stable diffusion demo for napari☆11Jun 7, 2026Updated 3 months ago
- Fractal backend☆21Updated this week
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Updated this week
- ☆23Mar 26, 2021Updated 5 years ago
- Linking napari layers with Matplotlib plots☆46Jul 1, 2026Updated 2 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆47Dec 4, 2025Updated 9 months ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 4 years ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Napari plugin for vollseg☆14Jul 16, 2025Updated last year
- ☆15Jan 22, 2026Updated 8 months ago
- ☆29Aug 29, 2024Updated 2 years ago
- Most of us study and work at the Bio-image Analysis Technology Development group at the DFG Cluster of Excellence “Physics of Life” at th…☆15Jun 27, 2025Updated last year
- ☆38Dec 13, 2023Updated 2 years ago
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Jul 1, 2026Updated 2 months ago
- Framework for multi-omics data integration by autoencoders☆33Jan 20, 2026Updated 8 months ago