"Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow-based image analysis and new integrated methods for cloud computing applied to life sciences.
☆15Apr 30, 2023Updated 2 years ago
Alternatives and similar repositories for Defragmentation_TrainingSchool_EOSC-Life_2022
Users that are interested in Defragmentation_TrainingSchool_EOSC-Life_2022 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Python-based tool for parallelized conversion of image datasets from various formats to OME-Zarr, with support for distributed processi…☆23Updated this week
- A collection of demonstration materials for MorphoLibJ.☆12Jan 12, 2023Updated 3 years ago
- Graph-based framework to manipulate and analyze cell lineages from cell tracking data☆24Mar 19, 2026Updated last week
- GPU-accelerated Image Processing library for Python☆55Mar 19, 2026Updated last week
- Program and links to the material for the GloBIAS Training School 2025, Kobe, Japan.☆22Oct 27, 2025Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Course material for Data Analysis and Visualization with Python☆26Nov 30, 2025Updated 3 months ago
- A basis for a napari plugin for manually correcting cell segmentation in 3D (z, y, x) or 4D (t, z, y, x) (virtual) arrays.☆10Mar 6, 2026Updated 3 weeks ago
- Napari training material for a workshop by the CZI funded initiatives LIBRE hub, Napari, and several amazing volunteers☆10Sep 28, 2023Updated 2 years ago
- A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design☆14Jul 27, 2023Updated 2 years ago
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Jun 6, 2023Updated 2 years ago
- A tutorial of classical shape analysis methods☆11Nov 25, 2023Updated 2 years ago
- ☆14Feb 24, 2026Updated last month
- Collection of useful (to me) python scripts for interacting with napari☆11Aug 14, 2022Updated 3 years ago
- 2D and 3D image deconvolution with python☆15Sep 20, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Various parts made for fluorescence microscopy + optics work☆16Jul 22, 2019Updated 6 years ago
- 3D shape analysis using deep learning☆31Oct 8, 2025Updated 5 months ago
- ☆12Oct 7, 2020Updated 5 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Nov 25, 2025Updated 4 months ago
- Transformer-based cell tracking for live-cell microscopy☆125Feb 1, 2026Updated last month
- Cytomine client and utilities in Python☆24Oct 1, 2025Updated 5 months ago
- Voreen volume renderer☆24Sep 10, 2014Updated 11 years ago
- ☆13Jul 1, 2021Updated 4 years ago
- Command-line client for Fractal☆49Mar 20, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Reference implementation of the Graph Exchange File Format☆37Mar 18, 2026Updated last week
- ☆15Apr 27, 2018Updated 7 years ago
- A collection of useful python utilities from True North Intelligent Algorithms☆43Feb 2, 2026Updated last month
- PyTextureAnalysis is a Python package for analyzing the texture of images. It includes functions for calculating local orientation, degre…☆30Sep 9, 2024Updated last year
- Package providing bioimaging functionality using TileDB. Source of the tiledb-bioimg Python package.☆18Dec 17, 2025Updated 3 months ago
- ☆14Jan 26, 2021Updated 5 years ago
- python library for particles tracking in 2D+t and 3D+t scientific images☆16Jun 5, 2024Updated last year
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆12Jun 30, 2021Updated 4 years ago
- napari widgets for start-to-finish batch processing☆15Mar 1, 2026Updated 3 weeks ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Multi-Object Tracking with Integer Linear Equations☆38Mar 18, 2026Updated last week
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45May 1, 2025Updated 10 months ago
- Managing Open and Reproducible Computational Projects☆12Jan 21, 2025Updated last year
- An ImageJ script to align and stitch three-dimensional tiles and quickly explore terabyte-sized microscopy datasets☆13Feb 22, 2022Updated 4 years ago
- ☆14Sep 29, 2020Updated 5 years ago
- An introductory course to Python by the Center of Health Data Science (University of Copenhagen)☆22Mar 19, 2026Updated last week
- A network-based shape descriptor☆10Nov 7, 2022Updated 3 years ago