chensole / bioinformaticsLinks
☆14Updated 5 years ago
Alternatives and similar repositories for bioinformatics
Users that are interested in bioinformatics are comparing it to the libraries listed below
Sorting:
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆65Updated last month
- ☆15Updated 6 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated 3 weeks ago
- scripts☆20Updated 7 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago
- Genome annotation pipeline☆64Updated last year
- DNA序列比对结果 可视化展示工具☆56Updated 2 years ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆50Updated 3 months ago
- Bulked-Segregant Analysis using vcf file with or without parents☆31Updated 11 months ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆20Updated 3 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆49Updated 6 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆44Updated last year
- Genome haplotype assembly and assessment method☆12Updated 2 years ago
- Plant genome assembly and annotation pipeline using snakemake☆48Updated 6 months ago
- A novel genome assembly pipeline based on deep learning☆66Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- Useful bioinformatic scripts☆58Updated last year
- ☆75Updated 5 years ago
- ☆61Updated last year
- Scripts and procedures for detecting positively selected genes and codons in primates☆21Updated 5 years ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆38Updated 2 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆43Updated 2 weeks ago
- A pipeline for isoseq☆23Updated 7 years ago
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- DeepBSA is a novel bulked segregant analysis (BSA) software for the dissection of complex traits.☆21Updated last year
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 7 years ago
- A scalable variant calling and benchmarking framework supporting both short and long reads.☆14Updated 2 months ago
- Scripts that used in our chicken T2T manuscript.☆22Updated 2 years ago