DEMINING: a stepwise computational framework to directly detect expressed DNA and RNA mutations in RNA deep sequencing data (DEMINING).
☆11Jul 31, 2024Updated 2 years ago
Alternatives and similar repositories for DEMINING
Users that are interested in DEMINING are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jul 6, 2024Updated 2 years ago
- ☆18Feb 20, 2025Updated last year
- ☆33May 4, 2025Updated last year
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆36Jul 13, 2024Updated 2 years ago
- Public repo for STEP: Spatial Transcriptomics Embedding Procedure☆18Aug 6, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆12May 24, 2024Updated 2 years ago
- ☆21Mar 4, 2024Updated 2 years ago
- The current study provides a comprehensive insights into the PDAC metastatic biology.☆25Aug 30, 2026Updated last month
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆14Oct 17, 2024Updated 2 years ago
- ☆25Mar 17, 2026Updated 7 months ago
- Inferring natural selection by comparative population genomic analysis across species☆28Oct 31, 2023Updated 2 years ago
- Fast and Scalable Single Cell Differential Expression Analysis using Mixed-effects Models☆14Apr 8, 2026Updated 6 months ago
- ☆16Feb 28, 2025Updated last year
- ☆11Mar 13, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆31Apr 16, 2020Updated 6 years ago
- Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"☆11Oct 15, 2020Updated 6 years ago
- RES-Scanner is a software package for genome-wide identification and annotation of RNA-editing sites for any species with matched RNA-Seq…☆12Jul 13, 2016Updated 10 years ago
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequence☆32Sep 22, 2026Updated last month
- ☆11Sep 10, 2024Updated 2 years ago
- RNA editing detection based on machine learning☆10Feb 7, 2018Updated 8 years ago
- Binning (Newick) Phylogenetic Trees by Topology☆10Mar 11, 2019Updated 7 years ago
- Convergent substitution detection tool based on the PCOC model☆32Dec 2, 2021Updated 4 years ago
- Methods for decontamination of single cell data☆69Oct 9, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Find circRNAs in RNA-seq data.☆15Jul 5, 2016Updated 10 years ago
- ☆12Oct 18, 2024Updated 2 years ago
- Scripts and code for Kākāpō genomic data☆14Sep 4, 2023Updated 3 years ago
- ☆20Jan 23, 2026Updated 9 months ago
- Single-cell data analysis☆16May 24, 2026Updated 5 months ago
- ☆12May 13, 2024Updated 2 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Mar 21, 2021Updated 5 years ago
- Genotyping of paralog specific gene types☆23Aug 28, 2026Updated 2 months ago
- ☆37Jan 23, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- JAVA framework for accurate SNV assessment☆12Jun 28, 2021Updated 5 years ago
- ☆25Jun 6, 2025Updated last year
- PARM: Promoter Activity Regulatory Model☆27Jul 27, 2026Updated 3 months ago
- 项目简介：本项目基于GPT完成数据标注、分类、润色等工作，原理是多线程批量处理input的数据，经过GPT处理后输出output数据。☆14Aug 9, 2023Updated 3 years ago
- ☆23Oct 23, 2023Updated 3 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆24Jul 18, 2024Updated 2 years ago
- ☆25Apr 3, 2025Updated last year