☆11May 3, 2017Updated 9 years ago
Alternatives and similar repositories for MAGenTA
Users that are interested in MAGenTA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for the TRANSIT and TPP tools developed by the Ioerger Lab☆24Dec 23, 2025Updated 6 months ago
- A set of tools to analyse the output from TraDIS analyses☆24Jun 15, 2026Updated last month
- Convert a Genbank flat file to an NCBI ptt file☆17Aug 25, 2023Updated 2 years ago
- A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.☆21Oct 26, 2021Updated 4 years ago
- Python package for analyzing and visualizing iModulons☆15Jul 13, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA☆19Feb 29, 2024Updated 2 years ago
- Compute strain abundance in a defined microbial community☆10Jul 27, 2023Updated 2 years ago
- ☆14Jul 13, 2020Updated 6 years ago
- The code for paper "Synthetic Promoter Design in Escherichia coli based on Deep Genera-tive Network"☆32Nov 11, 2019Updated 6 years ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- ☆15Oct 7, 2025Updated 9 months ago
- Create NNN primers tiling codons of a gene for codon mutagenesis☆14Jan 13, 2021Updated 5 years ago
- FROGS is a galaxy/CLI workflow designed to produce an OTUs count matrix from high depth sequencing amplicon data.☆37Mar 24, 2026Updated 3 months ago
- Trinotate annotation report summaries in R☆13Feb 24, 2016Updated 10 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- wrangling and model-free analysis of microbial growth curve data in R with gcplyr☆39May 8, 2026Updated 2 months ago
- Promoter activity measurement and modeling; artificial promoter design and testing☆13Mar 24, 2023Updated 3 years ago
- Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…☆49Dec 21, 2021Updated 4 years ago
- Quantitative analysis of native tRNA populations using direct RNA nanopore sequencing (Lucas*, Pryszcz* et al., Nat Biotech 2023)☆17Sep 19, 2024Updated last year
- (Deprecated) Ansible roles to configure assorted compontents for an Ubuntu VM or container configured with https://github.com/galaxyproje…☆11Nov 9, 2024Updated last year
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 7 years ago
- Datamonkey - Run state-of-the-art statistical models through the comfort of your browser☆10Updated this week
- workflows for offline analysis of 16S rRNA Nanopore data☆17Jun 13, 2023Updated 3 years ago
- ☆14Dec 16, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆16Mar 17, 2023Updated 3 years ago
- useful command-line tools written to showcase hts-nim☆50Nov 10, 2020Updated 5 years ago
- Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegal…☆14Updated this week
- A Microbiology-based Rogue-Like Game written in Lua via Love2D☆12Jul 24, 2021Updated 4 years ago
- Recommendations to contenarized your bioinformatics software☆12May 30, 2018Updated 8 years ago
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 3 years ago
- Make machine learning simpler with Galaxy☆12Jul 16, 2024Updated 2 years ago
- A packer.io configuration for building out Galaxy (http://galaxyproject.org/) tool development environments.☆10Dec 1, 2024Updated last year
- ☆17Nov 19, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Very very long reads, indeed☆13Apr 30, 2017Updated 9 years ago
- Metabolite Atlas Main Repository☆16Updated this week
- RetroPath2.0 to pathways☆18Jan 28, 2026Updated 5 months ago
- ☆11Jun 29, 2014Updated 12 years ago
- Calibrated clustering via knockoffs for single-cell genomics☆11Feb 13, 2025Updated last year
- bioinformatics for peter☆12Jun 14, 2026Updated last month
- NeuronMotif: deciphering cis-regulatory codes by layerwise demixing of deep neural networks☆16Jun 19, 2023Updated 3 years ago