gfftools - Galaxy toolshed repository
☆15Sep 13, 2017Updated 8 years ago
Alternatives and similar repositories for GFFtools-GX
Users that are interested in GFFtools-GX are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Some NGS workflow created by snakemake☆14Jun 30, 2026Updated 3 weeks ago
- JBrowse plugin that supports smallRNA alignments☆12Apr 8, 2019Updated 7 years ago
- ☆14Jul 13, 2020Updated 6 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18May 30, 2026Updated last month
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆16Nov 20, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- JBrowse plugin for methylation related things☆16Oct 9, 2018Updated 7 years ago
- shifts hg19/38 genomic position for feasible input format.☆12Jun 8, 2023Updated 3 years ago
- A long-read SV calling pipeline☆12Aug 13, 2021Updated 4 years ago
- A scalable variant calling and benchmarking framework supporting both short and long reads.☆14Sep 28, 2025Updated 9 months ago
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆22Mar 26, 2022Updated 4 years ago
- DIAMOND online documentation☆10Sep 2, 2020Updated 5 years ago
- create, manage, and upload track hubs for use in the UCSC genome browser☆56Apr 20, 2024Updated 2 years ago
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- Annotated multivariate observation data in R☆53Apr 1, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.☆13Jan 27, 2024Updated 2 years ago
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 5 years ago
- Database for collecting and curating scientific papers related to single-cell and spatial transcriptomics sequencing.☆14Oct 5, 2025Updated 9 months ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Dec 12, 2018Updated 7 years ago
- Genomic related tools☆76Nov 13, 2021Updated 4 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Code from "Deep Learning Of The Regulatory Grammar Of Yeast 5′ Untranslated Regions From 500,000 Random Sequences"☆16Sep 26, 2017Updated 8 years ago
- Unofficial Segment.io Management node.js SDK☆11Oct 17, 2017Updated 8 years ago
- Node.js, mongo DB blog template☆10Jul 18, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 生物信息学入门的系列课程,包括Linux, shell, Python 编程,建库测序,基因组学,以及系统进化,常用软件使用等内容。☆23Sep 16, 2021Updated 4 years ago
- ☆13Jun 26, 2026Updated 3 weeks ago
- Parse various Feeds and post them to your Mattermost server!☆11Nov 6, 2022Updated 3 years ago
- Pipeline for homeobox gene identification☆11Aug 8, 2023Updated 2 years ago
- Look Up Guild Information for Fungi in R☆25Mar 20, 2025Updated last year
- A JBrowse plugin for viewing GWAS data☆13Feb 13, 2022Updated 4 years ago
- A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats☆28Dec 15, 2025Updated 7 months ago
- JBrowse 1.x Plugin Registry☆14Sep 10, 2023Updated 2 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆30Mar 5, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A preprocessing pipeline for ChIP-seq, including alignment, quality control, and visualization.☆27Apr 24, 2017Updated 9 years ago
- Calculate GC% and GC deviation for circular genomes☆17Oct 15, 2025Updated 9 months ago
- Define regions in the genome☆33Mar 3, 2022Updated 4 years ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- BlasterJS - an open source JS library to display Blast results☆21Oct 18, 2019Updated 6 years ago
- Interactive visulizations for track-based genomic data in R☆15Sep 9, 2024Updated last year
- Algorithms to compute DNA complexity☆35May 24, 2022Updated 4 years ago