Open-source software pipeline for cancer classification from high-throughput data using machine learning.
☆19Feb 19, 2019Updated 7 years ago
Alternatives and similar repositories for CancerDiscover
Users that are interested in CancerDiscover are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DSDE Deep Learning Club☆40Mar 28, 2019Updated 7 years ago
- Higher level repo for aggregating all of Atlas workflow logic for Single Cell☆14Jul 9, 2026Updated 2 months ago
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- TCGA data acquisition and processing for Project Cognoma☆23Apr 19, 2018Updated 8 years ago
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BioPython/scikit-bio tutorial for EuroSciPy 2018☆13Aug 27, 2018Updated 8 years ago
- ☆11Jun 23, 2017Updated 9 years ago
- Software and analysis of metabolism studies across multiple cancer types☆11Sep 5, 2017Updated 9 years ago
- Building classifiers using cancer transcriptomes across 33 different cancer-types☆127Apr 30, 2019Updated 7 years ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆18Sep 10, 2024Updated 2 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆39Jul 10, 2024Updated 2 years ago
- ☆11Aug 21, 2018Updated 8 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆46Jun 25, 2026Updated 2 months ago
- Bioinformatics learning (for high performance computing, big data, and machine learning)☆19Jun 8, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Awk, bash, python scripts for processing NGS data☆14Nov 6, 2015Updated 10 years ago
- Collection of notes and scripts related to NGS☆14Sep 2, 2026Updated 2 weeks ago
- CRISPR NGS data analysis and visualization pipeline☆17Jul 26, 2019Updated 7 years ago
- ☆15Dec 13, 2020Updated 5 years ago
- Initial data release for drug-target interactions of the cancer targetome.☆16Jul 8, 2021Updated 5 years ago
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Nov 2, 2020Updated 5 years ago
- NGS DNA best practice pipeline for Illumina sequencing - alignment, variant calling, annotation and QC☆18Aug 22, 2025Updated last year
- PharmGKB NGS Pipeline☆19Oct 2, 2018Updated 7 years ago
- keynote☆15Sep 2, 2013Updated 13 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis☆18Nov 2, 2022Updated 3 years ago
- a R package to identify neoantigens from NGS data☆18Jun 29, 2017Updated 9 years ago
- An image analysis tool for measuring microorganism colony growth☆12Dec 12, 2025Updated 9 months ago
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆25Jul 29, 2026Updated last month
- Personal Cancer Genome Reporter (PCGR)☆283Updated this week
- Scripts to run several protocols to process and analyze Next-Generation Sequencing data☆18Aug 3, 2023Updated 3 years ago
- A straightforward object-oriented interactive fiction game engine to demonstrate quantum algorithms for agent-based AI pathfinding and he…☆13Nov 12, 2013Updated 12 years ago
- ☆27Jun 5, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A tutorial on breast cancer cell classification using deep learning in Tensorflow☆13Sep 21, 2017Updated 8 years ago
- ☆12Nov 15, 2018Updated 7 years ago
- A Java package for non-invasive cancer diagnosis using methylation profiles of cell-Free DNA.☆17Apr 2, 2019Updated 7 years ago
- A platform for matching patient-specific genomic profiles to precision cancer medicine clinical trials☆22Dec 5, 2023Updated 2 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆22Aug 29, 2022Updated 4 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆32Jun 9, 2017Updated 9 years ago
- HMS LINCS Project Repository☆15Aug 28, 2020Updated 6 years ago