HelikarLab / CancerDiscover
Open-source software pipeline for cancer classification from high-throughput data using machine learning.
☆18Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for CancerDiscover
- ☆19Updated 4 years ago
- Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features☆14Updated 6 years ago
- DSDE Deep Learning Club☆40Updated 5 years ago
- End-to-End learning framework for circular RNA classification from other long non-coding RNA using multimodal deep learning☆23Updated 4 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 4 years ago
- ☆19Updated 3 years ago
- Concise: Keras extension for regulatory genomics☆34Updated last year
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Updated 7 years ago
- Immunology Informatics - Big Data Analysis in Immunology - Tutorials☆21Updated 7 years ago
- Data Integration tool utilizing network information for predictive analyses☆16Updated last year
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆31Updated 7 years ago
- Machine learning workflows for analyzing high-throughput protein data☆24Updated 8 years ago
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆25Updated 7 months ago
- TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA featur…☆13Updated 2 years ago
- Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆46Updated 2 years ago
- ☆12Updated 5 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 8 years ago
- A flux balance analysis machine learning classifier for microbial GWAS☆13Updated 4 years ago
- Analytical R Tools for Mass Spectrometry☆14Updated last year
- Immune deconvolution of publicly available TCGA expression data☆11Updated 5 years ago
- Training and testing of DeepSEA models.☆14Updated 9 years ago
- Representation Learning for detection of phenotype-associated cell subsets☆65Updated 4 years ago
- This is a repo for the Machine Learning Immunogenicity Team in the August 2016 NCBI Hackathon☆23Updated 8 years ago
- TCGA data acquisition and processing for Project Cognoma☆20Updated 6 years ago
- Understanding sequence conservation with deep learning☆19Updated 7 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆44Updated 4 years ago
- ☆41Updated 6 years ago
- A deep learning package for predicting TF binding☆41Updated 4 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆77Updated 2 months ago