Open-source software pipeline for cancer classification from high-throughput data using machine learning.
☆19Feb 19, 2019Updated 7 years ago
Alternatives and similar repositories for CancerDiscover
Users that are interested in CancerDiscover are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DSDE Deep Learning Club☆40Mar 28, 2019Updated 7 years ago
- TCGA data acquisition and processing for Project Cognoma☆23Apr 19, 2018Updated 8 years ago
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 10 years ago
- Software and analysis of metabolism studies across multiple cancer types☆11Sep 5, 2017Updated 8 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Building classifiers using cancer transcriptomes across 33 different cancer-types☆127Apr 30, 2019Updated 7 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆38Jul 10, 2024Updated 2 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆46Jun 25, 2026Updated last month
- Bioinformatics learning (for high performance computing, big data, and machine learning)☆19Jun 8, 2017Updated 9 years ago
- CRISPR NGS data analysis and visualization pipeline☆17Jul 26, 2019Updated 7 years ago
- ☆15Dec 13, 2020Updated 5 years ago
- Initial data release for drug-target interactions of the cancer targetome.☆16Jul 8, 2021Updated 5 years ago
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Nov 2, 2020Updated 5 years ago
- NGS DNA best practice pipeline for Illumina sequencing - alignment, variant calling, annotation and QC☆18Aug 22, 2025Updated 11 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- keynote☆15Sep 2, 2013Updated 12 years ago
- PharmGKB NGS Pipeline☆19Oct 2, 2018Updated 7 years ago
- Toolbox for generic NGS analyses - A framework to quickly build pipelines and to perform large-scale NGS analysis☆18Nov 2, 2022Updated 3 years ago
- An image analysis tool for measuring microorganism colony growth☆12Dec 12, 2025Updated 7 months ago
- a R package to identify neoantigens from NGS data☆18Jun 29, 2017Updated 9 years ago
- Dataset: landmarks for registration of histology images☆34Jan 9, 2021Updated 5 years ago
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆25Jul 29, 2026Updated last week
- ☆37Updated this week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Personal Cancer Genome Reporter (PCGR)☆280Updated this week
- A straightforward object-oriented interactive fiction game engine to demonstrate quantum algorithms for agent-based AI pathfinding and he…☆13Nov 12, 2013Updated 12 years ago
- Personalized cancer epitope discovery and peptide vaccine prediction pipeline☆30Nov 14, 2017Updated 8 years ago
- Scripts to run several protocols to process and analyze Next-Generation Sequencing data☆18Aug 3, 2023Updated 3 years ago
- A toolkit to quantify cell dynamics in living tissues☆13Dec 18, 2018Updated 7 years ago
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆32Jun 9, 2017Updated 9 years ago
- A platform for matching patient-specific genomic profiles to precision cancer medicine clinical trials☆22Dec 5, 2023Updated 2 years ago
- A tutorial on breast cancer cell classification using deep learning in Tensorflow☆13Sep 21, 2017Updated 8 years ago
- HMS LINCS Project Repository☆15Aug 28, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Flexible Integration of Data with Deep LEarning☆51Mar 24, 2023Updated 3 years ago
- Seven Bridges Genomics aligner/caller debugging and analysis tools☆13Nov 20, 2018Updated 7 years ago
- Code for peptide ligand design with machine learning models.☆35Dec 8, 2024Updated last year
- ATAC-seq lab for BIOINF525☆10Mar 31, 2016Updated 10 years ago
- a set of NGS pipelines☆24Jun 30, 2026Updated last month
- Ceto is an NGS analysis system put together in a collaboration between the Bartom computational Lab, the Shilatifard lab, and other scien…☆25Oct 10, 2022Updated 3 years ago
- A curated list of mining resources from the web☆14Jul 19, 2018Updated 8 years ago