JasonJWilliamsNY / 2018_nih_datascience_rfi
This is a short response to the 2018 RFI on NIH Strategic Plan for Data Science
☆16Updated 7 years ago
Alternatives and similar repositories for 2018_nih_datascience_rfi:
Users that are interested in 2018_nih_datascience_rfi are comparing it to the libraries listed below
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 5 years ago
- ☆43Updated 9 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 7 years ago
- R markdown file to extract list of collaborators and affiliations from pubmed for NSF biosketch☆38Updated 7 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Stupid Simple Elastic Compute Cloud☆16Updated last year
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 10 months ago
- X things you should take into consideration if you code for big data analysis☆23Updated 6 years ago
- R tools to interact with hap.py output☆15Updated 5 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- ☆11Updated 7 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆30Updated 7 years ago
- UChicago BSD Quantitative Bootcamp 2020☆11Updated 3 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 5 years ago
- Examples of kallisto + sleuth☆11Updated 7 years ago
- Genetics training camp☆21Updated 4 years ago
- Response to blog post about Salmon☆37Updated 7 years ago
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- ☆13Updated 7 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 5 years ago
- variant discovery and annotation using GATK and Ensembl☆17Updated 11 years ago
- Transcript quantification import with automatic metadata detection☆68Updated 2 months ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- A flexible python program for generating figures from regions of the genome.☆13Updated 6 years ago