☆11Nov 30, 2024Updated last year
Alternatives and similar repositories for PPGB_MS2
Users that are interested in PPGB_MS2 are comparing it to the libraries listed below
Sorting:
- [Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations☆23Oct 13, 2025Updated 4 months ago
- ☆11Apr 10, 2022Updated 3 years ago
- ☆11Feb 5, 2024Updated 2 years ago
- ☆12Jan 16, 2025Updated last year
- Defined MRM transitions from untargeted metabolomics data☆11Nov 13, 2023Updated 2 years ago
- ☆13May 10, 2021Updated 4 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Sep 6, 2022Updated 3 years ago
- DeepMASS2 is a cross-platform GUI software tool, which enables deep-learning based metabolite annotation via semantic similarity analysis…☆14Jan 22, 2026Updated last month
- Shiny app for retention time prediction☆11Dec 1, 2025Updated 3 months ago
- ☆11Feb 20, 2026Updated 2 weeks ago
- Repo hosting the MetFrag website☆10Jan 24, 2025Updated last year
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Jun 1, 2023Updated 2 years ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆24Nov 11, 2024Updated last year
- ☆16Updated this week
- Rocker image for metabolomics data analysis☆13Oct 25, 2025Updated 4 months ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- ☆15Nov 26, 2021Updated 4 years ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Nov 14, 2023Updated 2 years ago
- mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data☆14Apr 9, 2016Updated 9 years ago
- ☆11Oct 7, 2025Updated 5 months ago
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Feb 14, 2021Updated 5 years ago
- This repository contains training data for retention time prediction for the identification of metabolites from non-targeted LC-MS based …☆59Dec 11, 2025Updated 2 months ago
- Improve the accuracy of database search by using BERT to embed MS/MS reasonably☆20Oct 15, 2024Updated last year
- ☆21Mar 26, 2025Updated 11 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Jan 24, 2024Updated 2 years ago
- ☆22Sep 18, 2025Updated 5 months ago
- Self-supervised learning of molecular representations from millions of tandem mass spectra using DreaMS (Nat Biotechnology)☆163Updated this week
- An open-source Python package to unify raw MS data accession and storage.☆31Updated this week
- ☆14Mar 6, 2022Updated 4 years ago
- Publicly-accessible repo for ACS paper "Rapid Approximate Subset-Based Spectra Prediction for Electron Ionization−Mass Spectrometry" (RAS…☆26Jan 25, 2023Updated 3 years ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Oct 31, 2025Updated 4 months ago
- A known-to-unknown metabolite identification workflow☆21Sep 15, 2020Updated 5 years ago
- A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data☆26Jan 21, 2024Updated 2 years ago
- Tandem Mass Spectrum Prediction with Graph Transformers☆99Aug 26, 2024Updated last year
- R Interface to the Metabolights REST API☆11Aug 19, 2025Updated 6 months ago
- Prediction of glycopeptide fragment mass spectra by deep learning☆10Feb 20, 2024Updated 2 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Updated this week
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆15Dec 6, 2023Updated 2 years ago
- Goslin is the Grammar on succinct lipid nomenclature.☆12Nov 20, 2025Updated 3 months ago