Alternatives and similar repositories for PPGB_MS2:

Users that are interested in PPGB_MS2 are comparing it to the libraries listed below

• savantas / MAGMa-plus
  allows MAGMa metabolite identification with dynamic parameter selection
  ☆9Updated 6 years ago
• Elizachem / SMRT_transfer
  ☆10Updated 3 years ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 3 years ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆13Updated last year
• zhanghailiangcsu / MSBERT
  Improve the accuracy of database search by using BERT to embed MS/MS reasonably
  ☆17Updated 6 months ago
• idslme / IDSL_MINT
  A Deep Learning Framework to Interpret Raw Mass Spectrometry (m/z) Data
  ☆23Updated last year
• shuzhao-li-lab / PythonCentricPipelineForMetabolomics
  Python pipeline for metabolomics data preprocessing, QC, standardization and annotation
  ☆14Updated 5 months ago
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 2 years ago
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• PHOENIXcenter / deeprtalign
  a deep learning-based retention time alignment tool for large cohort LC-MS data analysis
  ☆12Updated last year
• elnurgar / mzxml-precursor-corrector
  ☆8Updated 10 months ago
• huaxuyu / masscube
  ☆10Updated last week
• pnnl / MSAC
  ☆23Updated last month
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆16Updated last year
• MRMkit / MRMkit
  ☆9Updated 3 weeks ago
• hcji / DeepMASS
  A known-to-unknown metabolite identification workflow
  ☆20Updated 4 years ago
• XiminHu / mass-suite
  ☆25Updated last year
• merlin-ms / awesome-mass-spectral-libraries
  ☆18Updated last year
• murphy17 / graff-ms
  Efficiently predicting high resolution mass spectra with graph neural networks
  ☆26Updated last year
• YuanyueLi / MSEntropy
  Spectral entropy for mass spectrometry data.
  ☆27Updated 2 months ago
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• Qiong-Yang / GNN-RT
  ☆15Updated 3 years ago
• danielatrivella / NP3_MS_Workflow
  A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis
  ☆13Updated 2 weeks ago
• eMetaboHUB / FragHub
  ☆12Updated this week
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆14Updated 2 years ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆14Updated 8 years ago
• OpenMS / streamlit-template
  ☆12Updated this week
• YuanyueLi / FlashEntropySearch
  Flash entropy search
  ☆14Updated last year
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆20Updated 6 months ago